New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 4846196 =61 (1.060)3 (0.050) 3/328 NT 4.9% coding (946/2475 nt) PP_4261 cation‑transporting P‑type ATPase
?AE015451 4846222 = 57 (1.030)coding (972/2475 nt) PP_4261 cation‑transporting P‑type ATPase
Rejected: Frequency below/above cutoff threshold.

CGCGCGACTTGCGAACGCGCCACCTGACCATGGACGTTTCGGTGTCGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGTTGAAAGCGC  >  AE015451/4845963‑4846416
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                            
cgcgcgACTTGCGAACGCGCCACCTGACCATGGACGTTTCGGTGTCGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCt                                                                                                                                                                                                                             >  1:1037312/1‑235 (MQ=255)
       cTTGCGAACGCGCCACCTGACCATGGACGTTTCGGTGTCGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTgg                                                                                                                                                                                                                     <  1:491134/236‑1 (MQ=255)
                             aTGGACGTTTCGGTGTCGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCCGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAAc                                                                                                                                                                                                >  1:651631/1‑235 (MQ=255)
                                        ggTGTCGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTc                                                                                                                                                                                     >  1:1032823/1‑235 (MQ=255)
                                        ggTGTCGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCa                                                                                                                                                                                    <  1:516153/236‑1 (MQ=255)
                                        ggTGTCGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAg                                                                                                                                                                                   >  1:587800/1‑236 (MQ=255)
                                            tCGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAg                                                                                                                                                                                                     >  2:998730/1‑215 (MQ=255)
                                             cGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGa                                                                                                                                                                                >  1:1049976/1‑235 (MQ=255)
                                                 ggCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTa                                                                                                                                                                            <  1:525207/235‑1 (MQ=255)
                                                   ccATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTa                                                                                                                                                                            <  1:820120/233‑1 (MQ=255)
                                                       tGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTgcg                                                                                                                                                                     >  1:693570/1‑236 (MQ=255)
                                                          ccTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTGCCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTa                                                                                                                                                                            <  2:858843/226‑1 (MQ=255)
                                                          ccTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTgcggcg                                                                                                                                                                  >  1:881654/1‑236 (MQ=255)
                                                                      tGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGGGTTa                                                                                                                                                                            >  2:850622/1‑214 (MQ=255)
                                                                                  gACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGa                                                                                                                                                                 <  2:408381/213‑1 (MQ=255)
                                                                                   aCAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGgcgc                                                                                                                                         >  1:153992/1‑236 (MQ=255)
                                                                                   aCAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGGCAACCTGCTGCCAGCCTCATGCCTgcgc                                                                                                                                                                                                                         >  1:108072/1‑156 (MQ=255)
                                                                                    cAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGa                                                                                                                                                                 <  2:1073820/211‑1 (MQ=255)
                                                                                            ccTGGCCGCGGCGAGCTTTATTTCGCCACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTg                                                                                                                                                                       <  2:115034/196‑1 (MQ=255)
                                                                                              tGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTgcggcg                                                                                                                                                                  <  2:693567/200‑1 (MQ=255)
                                                                                                      gcgAGCTTTATTTCGACACGGTGTGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGcc                                                                                                                                               <  2:806387/211‑1 (MQ=255)
                                                                                                                  tCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAg                                                                                                          <  1:1047748/236‑1 (MQ=255)
                                                                                                                    gccgcGGTGGGCATGCTCGCCCTGTTCCTGCGGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCg                                                                                                                                             <  2:153990/195‑1 (MQ=255)
                                                                                                                     acacGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCg                                                                                                                                                            <  2:670553/183‑1 (MQ=255)
                                                                                                                       acGGTGGGCATGTCCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGt                                                                                                                                                                              <  2:157908/163‑1 (MQ=255)
                                                                                                                             tcgacgctggagcggccctcgacgatgcgcccgtcggcagggatggccgcgccgggcagcacctgcacggtgtcgccgcactgtaactcgctgagcaggatgcgttcgCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGc                                                                                                                                                                                       >  2:276192‑M1/109‑148 (MQ=255)
                                                                                                                             ggCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGt                                                                                                                                                     >  2:760287/1‑182 (MQ=255)
                                                                                                                              gCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACCCCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTc                                                                                                  >  1:76996/1‑232 (MQ=255)
                                                                                                                                aTGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTgcggcg                                                                                                                                                                  <  1:44506/166‑1 (MQ=255)
                                                                                                                                aTGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGa                                                                                                                                                                 >  2:139137/1‑167 (MQ=255)
                                                                                                                                aTGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGa                                                                                                                                                                 <  1:139139/167‑1 (MQ=255)
                                                                                                                                    tCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTcgac                                                                                        <  1:659155/236‑1 (MQ=255)
                                                                                                                                      gCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTcgacga                                                                                      >  1:938791/1‑236 (MQ=255)
                                                                                                                                          tGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCggg                                                                                                                                                                                                          >  2:327160/1‑116 (MQ=255)
                                                                                                                                          tGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAAt                                                                                    >  2:362934/1‑234 (MQ=255)
                                                                                                                                                    gACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGa                                                                                                                                                                 <  1:793066/147‑1 (MQ=255)
                                                                                                                                                    gACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGa                                                                                                                                                                 >  2:793063/1‑147 (MQ=255)
                                                                                                                                                       cGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGc                                                                      >  1:788075/1‑235 (MQ=255)
                                                                                                                                                              tACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGgcgc                                                                                                                                                                                                       >  2:90732/1‑99 (MQ=255)
                                                                                                                                                                ggcagggatgaccgcgccgggcagcacctgcacggtgtcgccgcactgtaactcgctgagcaggatgcgttcgCTg                                                                                                                                                                                                                            >  2:110269‑M1/74‑76 (MQ=255)
                                                                                                                                                                ggcagggatgaccgcgccgggcagcacctgcacggtgtcgccgcactgtaactcgctgagcaggatgcgttcgCTg                                                                                                                                                                                                                            <  1:110271‑M1/3‑1 (MQ=255)
                                                                                                                                                                    gAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGc                                                         <  1:455457/235‑1 (MQ=255)
                                                                                                                                                                            cgcgccgggcagcacctgcacggtgtcgccgcactgtaactcgctgagcaggatgcgttcgCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCt                                                                                                                                                                                         >  2:653539‑M1/62‑99 (MQ=255)
                                                                                                                                                                             gccCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGCCGCCATCGGGCGCAGCGCACGCATCCTGCTCAGCGCGTTACAGTGCGGCGCCCCCGt                                                                                                                                                           >  2:55683/1‑128 (MQ=255)
                                                                                                                                                                               ccGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAg                                                                   >  2:877138/1‑214 (MQ=255)
                                                                                                                                                                                     gcgcACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGcc                                                           <  1:293822/216‑1 (MQ=255)
                                                                                                                                                                                            gcggcgGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCCGCGAACGCATCCTGCTCAGCGAGTTACAg                                                                                                                                                                         >  2:105950/1‑99 (MQ=255)
                                                                                                                                                                                                cggcCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTcgacg                                                                                       <  1:668734/177‑1 (MQ=255)
                                                                                                                                                                                                cggcCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTcgacg                                                                                       >  2:668731/1‑177 (MQ=255)
                                                                                                                                                                                                cggcCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGc                                                                      >  2:1086707/1‑194 (MQ=255)
                                                                                                                                                                                                  gcCACTGAACAGCTCGTCAAACTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGGACGCATCCTGCTCAGCGAGTTACAGTgcggcg                                                                                                                                                                  <  2:1027292/100‑1 (MQ=255)
                                                                                                                                                                                                     aCTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGgc                                                                                                                     <  2:614945/142‑1 (MQ=255)
                                                                                                                                                                                                         cacaGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACg                   <  1:999204/236‑1 (MQ=255)
                                                                                                                                                                                                          acaGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCa                                                    >  1:146001/1‑202 (MQ=255)
                                                                                                                                                                                                            aGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGAGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCt                 <  1:600815/235‑1 (MQ=255)
                                                                                                                                                                                                                 gTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGccc                                                                                                                                              >  2:148014/1‑105 (MQ=255)
                                                                                                                                                                                                                 gTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACg                                                  <  2:1046418/197‑1 (MQ=255)
                                                                                                                                                                                                                    aaCCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGGCGCTCCAGCGTCGACGAATCgc                                                                                 >  2:1066843/1‑163 (MQ=255)
                                                                                                                                                                                                                    aaCCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGAc                                                                          >  2:147852/1‑170 (MQ=255)
                                                                                                                                                                                                                    aaCCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACg            >  1:856955/1‑232 (MQ=255)
                                                                                                                                                                                                                    aaCCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGtt          >  2:1032225/1‑234 (MQ=255)
                                                                                                                                                                                                                         gctgcCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTa                                                                                                                                                                            <  2:249290/67‑1 (MQ=255)
                                                                                                                                                                                                                         gctgcCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTa                                                                                                                                                                            >  1:249293/1‑67 (MQ=255)
                                                                                                                                                                                                                         gctgcCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTcga                                                                                         >  2:722925/1‑150 (MQ=255)
                                                                                                                                                                                                                         gagcaggatgcgttcgCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGcgcg                                                                                                                                        <  2:141107‑M1/87‑1 (MQ=255)
                                                                                                                                                                                                                           ggcCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGTTGAAAgcgc  <  1:989776/234‑1 (MQ=255)
                                                                                                                                                                                                                                   tCATGCCTGCGCCTGGACGCCATCg                                                                                                                                                                                                            >  2:716898/1‑25 (MQ=255)
                                                                                                                                                                                                                                      tcccTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGTGTcg                                                                                          <  2:588551/134‑1 (MQ=255)
                                                                                                                                                                                                                                        ccTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGTTGAAAgc    <  1:438797/220‑1 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                            
CGCGCGACTTGCGAACGCGCCACCTGACCATGGACGTTTCGGTGTCGCTGGCCATTGGCCTGGCGTTCGGTGCCGGCATCTGGACAGCCATCACTGGCAGCGGCGAGCTTTATTTCGACACGGTGGGCATGTTCGCCCTGTTCCTGCTGACCGGCCGCTACCTGGAGCGCCGCGCCCGCGAGCGCACAGCGGCGGCCACTGCACAGCTGGTCAACCTGCTGCCAGCCTCATGCCTGCGCCTGGACGCCATCGGGCGCAGCGAACGCATCCTGCTCAGCGAGTTACAGTGCGGCGACACCGTGCAGGTGCTGCCCGGCGCGGTCATCCCTGCCGACGGGCGCATCGTCGAGGGCCGCTCCAGCGTCGACGAATCGCTGCTGACCGGCGAGTATCTGCCGCAACCACGCCGGGTGGGTGAGCGGGTCACTGGCGGTACGCTGAACGTTGAAAGCGC  >  AE015451/4845963‑4846416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.