New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	741491 =	NA (NA)	7 (0.130)	5/328	NT	NA	intergenic (+91/‑409)	PP_t12/PP_0635	tRNA‑Thr/Group II intron‑encoding maturase
	?	AE015451	741509 =	NA (NA)					intergenic (+109/‑391)	PP_t12/PP_0635	tRNA‑Thr/Group II intron‑encoding maturase

AAACAGGGGTTTGCGTTACGGGTGTGAGCAGTGGTACGTTGCGCTACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTG  >  AE015451/741276‑741690                                                                                                                                                                                                                                          |                                                                                                                                                                                      aaaCAGGGGTTTGCGTTACGGGTGTGAGCAGTGGTACGTTGCGCTACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCg                                                                                                                                                                                     >  1:1066099/1‑236 (MQ=255)        ggTTTGCGTTACGGGTGTGAGCAGTGGTACGTTGCGCTACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGtt                                                                                                                                                                              <  1:561123/236‑1 (MQ=255)               gTTACGGGTGTGAGCAGTGGTACGTTGCGCTACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTgtggtg                                                                                                                                                                        >  1:1085483/1‑235 (MQ=255)                     ggTGTGAGCAGTGGTACGTTGCGCTACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGt                                                                                                                                                                 <  1:840515/236‑1 (MQ=255)                              aGTGGTACGTTGCGCTACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTgtgggg                                                                                                                                                                        >  2:986956/1‑218 (MQ=255)                                             tACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCg                                                                                                                                                                                     <  1:840724/192‑1 (MQ=255)                                             tACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCg                                                                                                                                                                                     >  2:840721/1‑192 (MQ=255)                                             tACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAgggg                                                                                                                                                 >  1:110960/1‑226 (MQ=255)                                              acacGCCGGTGTAGCTCAGTCGGTAGAGCTGCGCACTCGTACCGCGTAGGTCGCGGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGtt                                                                                                                                                                              <  1:114156/198‑1 (MQ=255)                                                  gCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTaca                                                                                                                                    >  1:727287/1‑236 (MQ=255)                                                   ccGTTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGt                                                                                                                                                                 <  2:793567/206‑1 (MQ=255)                                                       tgtAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAgg                                                                                                                                                   >  2:595962/1‑216 (MQ=255)                                                             tCAGTCGGTAGTGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGGCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGTGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAg                                                                                                                         <  1:1017309/236‑1 (MQ=255)                                                             gcAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                                                                                                                              <  2:1006039/214‑1 (MQ=255)                                                                 tCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTGGCGCGGAAGCGCCAACCGCGTGGGTgtgggg                                                                                                                                                                        >  2:214461/1‑183 (MQ=39)                                                                    gTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGGGGCCAAGTGGGTGa                                                                                                                                                           >  2:207337/1‑195 (MQ=255)                                                                       gagCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                                                                                                                              <  1:25970/205‑1 (MQ=255)                                                                        agcagcGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTa                                                                                                                                      >  1:768529/1‑212 (MQ=255)                                                                          cagcGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGAc                                                                                                                                                          <  2:449121/190‑1 (MQ=255)                                                                              gcACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTgg                                                                                                                                                               >  1:158813/1‑181 (MQ=255)                                                                                aCTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAg                                                                                                       >  1:397473/1‑235 (MQ=255)                                                                                  tCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAgg                                                                                                      >  1:826193/1‑234 (MQ=255)                                                                                   cGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAgg                                                                                                                                                   <  2:768526/188‑1 (MQ=255)                                                                                    gTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTaca                                                                                                                                    <  2:382571/202‑1 (MQ=255)                                                                                                    tggTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGAcc                                                                                  <  1:255936/235‑1 (MQ=255)                                                                                                      gTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACcgc                                                                                >  1:441007/1‑236 (MQ=255)                                                                                                            tgccTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGt                                                                                                                                                             >  2:679296/3‑153 (MQ=255)                                                                                                              ccTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTga                                                                        <  1:523879/236‑1 (MQ=255)                                                                                                              ccTGTCGCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTaca                                                                                                                                    <  2:1086403/176‑1 (MQ=255)                                                                                                               cTGTCTCCGGCCCCAGAAGCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAg                                                                                                                         <  1:206620/186‑1 (MQ=255)                                                                                                                      cGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGa                                                                                    <  2:826190/216‑1 (MQ=255)                                                                                                                                        gTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGcc                                              <  1:1052271/236‑1 (MQ=255)                                                                                                                                                   tttCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCGGCTTGGTTGTGGTGGCCAAGTGGGTGACtt                                                                                                                                                        <  1:478657/119‑1 (MQ=255)                                                                                                                                                      ctcGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGaa                                 >  1:739073/1‑235 (MQ=255)                                                                                                                                                       tcGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAg                                    <  1:840487/231‑1 (MQ=255)                                                                                                                                                         gCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCg                              <  1:1072333/235‑1 (MQ=255)                                                                                                                                                            aCCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAg                                    <  2:1048851/226‑1 (MQ=255)                                                                                                                                                                      aaTAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGcc                                                                                                                                                                     <  1:1043392/87‑1 (MQ=255)                                                                                                                                                                      aaTAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGcc                                                                                                                                                                     >  2:1043389/1‑87 (MQ=255)                                                                                                                                                                          gAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTACGCGCAACCCGCTTGGTTGTGGTGGc                                                                                                                                                                      >  2:61129/1‑82 (MQ=255)                                                                                                                                                                          gAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCCACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAACGTCCTCTACACACCCGGCAAggg                                                                                                                       >  2:273359/1‑129 (MQ=255)                                                                                                                                                                               ccGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACAACCGGCAAGGGGAAGTGGTAGCCGGAGGCAAGGGTGTCGCGGGTGAcc                                                                                  >  1:61342/1‑161 (MQ=25)                                                                                                                                                                                     tgtgCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACcgc                                                                                >  2:742742/1‑157 (MQ=32)                                                                                                                                                                                     tgtgCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATa                          >  1:76448/1‑211 (MQ=31)                                                                                                                                                                                     tgtgCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTg  >  1:503616/1‑235 (MQ=32)                                                                                                                                                                                        gCGGGCTTTTTTGTGTGCGCCAGGCGTGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAg                                                            <  1:707181/174‑1 (MQ=14)                                                                                                                                                                                          gggCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTa                                                                                                              >  2:530962/1‑122 (MQ=33)                                                                                                                                                                                          gggCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTa                                                                                                              <  1:530965/122‑1 (MQ=32)                                                                                                                                                                                                                                          |                                                                                                                                                                                      AAACAGGGGTTTGCGTTACGGGTGTGAGCAGTGGTACGTTGCGCTACACGCCGGTGTAGCTCAGTCGGTAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGATTCCTGTCTCCGGCACCAGAATCAGTTGGTCTATGGCGATTTCTCGCTACCTGGCACCAATAGAAGCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTG  >  AE015451/741276‑741690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.