New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1510272	50 (0.870)	3 (0.050)	3/332	NT	5.7%	coding (1295/1818 nt)	PP_1325	putative lipoprotein
	?	AE015451	= 1510301	50 (0.890)					coding (1266/1818 nt)	PP_1325	putative lipoprotein

TGGCATAGACCGGCACGTCACCGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGGCGGC  >  AE015451/1510096‑1510514                                                                                                                                                                                                              |                                                                                                                                                                                                                      tGGCATAGACCGGCACGTCACCGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTcg                                                                                                                                                                                         >  1:181666/1‑236 (MQ=255)      tAGACCGGCACGTCACCGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGAt                                                                                                                                                                                                >  2:693052/1‑224 (MQ=255)                cGTCACCGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGGTGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAggg                                                                                                                                                                            >  1:519463/1‑234 (MQ=255)                cGTCACCGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGa                                                                                                                                                                                  >  1:628395/1‑228 (MQ=255)                    aCCGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGtt                                                                                                                                                                          <  2:786211/232‑1 (MQ=255)                    aCCGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTcc                                                                                                                                                                        <  1:410128/234‑1 (MQ=255)                      cGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGc                                                                                                                                                                      >  2:619284/1‑234 (MQ=255)                      cGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCa                                                                                                                                                                    <  1:977004/236‑1 (MQ=255)                        gCGTAGTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGgccaga                                                                                                                                                                                                                 >  1:196995‑M2/1‑183 (MQ=255)                        gCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAgg                                                                                                                                                                             <  2:712458/225‑1 (MQ=255)                        gCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCAtt                                                                                                                                                                  >  1:171531/1‑236 (MQ=255)                              tGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATg                                                                                                                                                                                               >  1:446371/1‑201 (MQ=255)                              tGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTc                                                                                                                                                            >  1:973789/1‑236 (MQ=255)                                     tCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTc                                                                                                                                                      >  1:421401/1‑235 (MQ=255)                                         ggTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAgg                                                                                                                                                                             <  2:730628/208‑1 (MQ=255)                                                      tGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCa                                                                                                                                     <  1:619287/235‑1 (MQ=255)                                                          gcgcCTGTGGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCAt                                                                                                                                                                   <  1:152414/201‑1 (MQ=255)                                                            gcCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGCCGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAgg                                                                                                                                                                             <  1:345884/189‑1 (MQ=255)                                                             ccTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTcg                                                                                                                                                                                         <  2:759333/176‑1 (MQ=255)                                                                      gggTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCAt                                                                                                                    <  1:693055/236‑1 (MQ=255)                                                                       ggTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCAt                                                                                                                    <  2:841776/235‑1 (MQ=255)                                                                         tCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTcg                                                                                                                 <  1:405288/236‑1 (MQ=255)                                                                            aggcgaggAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGCACATGCCGGCAATTTGCTGGGCCAGGGCGCCCgg                                                                                                                                                                                                         >  2:302212/1‑145 (MQ=255)                                                                              gcgaggAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTcggcgg                                                                                                                                                                                     <  2:989393/163‑1 (MQ=255)                                                                                             tCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCt                                                                                                            <  1:38973/221‑1 (MQ=255)                                                                                               gATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCCCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCgg                                                                                                                                               >  2:992855/1‑184 (MQ=255)                                                                                                aTGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGgc                                                                                          >  1:927443/1‑236 (MQ=255)                                                                                                 tGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACg                                                                                            <  2:1011128/233‑1 (MQ=255)                                                                                                     cTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGa                                                                                     >  1:409768/1‑236 (MQ=255)                                                                                                                aCGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCgg                                                                                                                                               >  1:313491/1‑167 (MQ=255)                                                                                                                aCGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGc                                                                                                >  1:237198/1‑214 (MQ=255)                                                                                                                       tgCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACg                                                                                            <  1:731530/211‑1 (MQ=255)                                                                                                                        ccAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTTTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAgg                                                                                                                                                                                                                 <  2:573809/92‑1 (MQ=255)                                                                                                                                gctgcCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTcggc                                                                                                                                                                                       <  2:115295/111‑1 (MQ=255)                                                                                                                                 ctgcCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGc                                                         >  1:832517/1‑236 (MQ=255)                                                                                                                                     cgccCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACg                                                                                            <  2:923583/197‑1 (MQ=255)                                                                                                                                     cgccCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACt                                                     <  1:579748/236‑1 (MQ=255)                                                                                                                                         cACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTcgc                                                 >  1:637987/1‑236 (MQ=255)                                                                                                                                                     cAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGgccagagcgaaggccgcgccaagagcctgcaaagcacggtgggcggcagcatcgctgcacaaccgtcgcgccgccaggacatcgacttcatcttcctcgcctcgaccccacaacaggcgcaacagatcaagc                                                                                   >  1:853788‑M2/1‑58 (MQ=255)                                                                                                                                                      aGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGccc                                                       >  1:290092/1‑216 (MQ=255)                                                                                                                                                           ctTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCggcgcg                                                                     >  2:653939/1‑198 (MQ=255)                                                                                                                                                             tGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCTAGGGCTACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGgc                                                                                          <  1:582792/175‑1 (MQ=255)                                                                                                                                                                cgcgGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAgg                          >  1:835840/1‑236 (MQ=255)                                                                                                                                                                cgcgGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAgg                          >  1:1012093/1‑236 (MQ=255)                                                                                                                                                                 gcgGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGgccagagcgaaggccgcgccaagagcctgcaaagcacggtgggcggcagcatcgctgcacaaccgtcgcgccgccaggacatcgacttcatcttcctcgcctcgaccccacaacaggcgcaaca                                                                                           <  2:853785‑M2/170‑125 (MQ=255)                                                                                                                                                                       ttCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAAcg                   >  1:66604/1‑235 (MQ=255)                                                                                                                                                                       ttCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCAGTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTcgccgcgc                                                                                                           >  2:313208/1‑146 (MQ=255)                                                                                                                                                                                  gcAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTtgt        >  1:530894/1‑236 (MQ=255)                                                                                                                                                                                      cTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTcggc                                                                                                               >  2:863584/1‑127 (MQ=255)                                                                                                                                                                                         gAACAGGTCGGCAATTTGCTGGgccagagcgaaggccgcgccaagagcctgcaaagcacggtgggcggcagcatcgctgcacaaccgtcgcgccgccaggacatcgacttcatcttcctcgcctcgaccccacaacaggcgcaacagatcaagccgaccctgaacttccagtacgccggtgacgtgccggtctatgccacctcgaacctgtacagcgccagcggtgacatcaacc  <  1:1073018‑M2/235‑214 (MQ=255)                                                                                                                                                                                                  ggCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCgcggcg                                                            >  2:92313/1‑168 (MQ=255)                                                                                                                                                                                                  ggCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGGCACCCCATTCGCCGCTCGGCACCat                                                                                                   >  1:160142/1‑128 (MQ=255)                                                                                                                                                                                                   gCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGgcggcg                                                                                                                                                                                   <  2:804089/48‑1 (MQ=255)                                                                                                                                                                                                   gCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGcgcg                                                                                       >  2:969604/1‑140 (MQ=255)                                                                                                                                                                                                      atgtGCGGGGCAAGGGCGACCGGCTGGGCGAGGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGcggcgg                                                           <  2:74548/162‑1 (MQ=255)                                                                                                                                                                                                              |                                                                                                                                                                                                                      TGGCATAGACCGGCACGTCACCGGCGTACTGGAAGTTCAGGGTCGGCTTGATCTGTTGCGCCTGTTGTGGGGTCGAGGCGAGGAAGATGAAGTCGATGTCCTGGCGGCGCGACGGTTGTGCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGGCGGC  >  AE015451/1510096‑1510514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.