New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 1656686 =43 (0.750)4 (0.070) 4/324 NT 8.9% coding (83/4527 nt) PP_1449 conserved exported protein of unknown function
?AE015451 1656725 = 41 (0.750)coding (44/4527 nt) PP_1449 conserved exported protein of unknown function

CGGCTGCGGTGGCGTTGTTCAGCACCAGGCCCGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGAC  >  AE015451/1656501‑1656952
                                                                                                                                                                                                                                |                                                                                                                                                                                                                                   
ctgcccggcggccgcctgcgcctggactaccaacgcgccttgtacaccagcgacctgccccgcccgcggctggagcccggcttctgggtgctggactggaccctgagcatctgattcacccacaacaaagagaacgagaaaatgcaaacactctcgcagttaccgcctgttcgcccggataccttgcgctgggcaatcttcctcgccgtgctcgggcccagcgcAAGGTATcc                                                                                                                                                                                                                             <  1:780702‑M2/9‑1 (MQ=255)
  gCTGCGGTGGCGTTGTTCAGCACCAGGCCCGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAg                                                                                                                                                                                                                                   >  1:238894/1‑225 (MQ=255)
                              ccGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGttt                                                                                                                                                                                              >  2:553500/1‑234 (MQ=255)
                                      gCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTtct                                                                                                                                                                                     <  1:539354/235‑1 (MQ=255)
                                      gCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTtct                                                                                                                                                                                     <  1:357711/235‑1 (MQ=255)
                                          cGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTtc                                                                                                                                                                                <  1:231254/236‑1 (MQ=255)
                                               tAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCttt                                                                                                                                                                           <  1:553503/236‑1 (MQ=255)
                                                aGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGc                                                                                                                                                                                                        >  2:1071218/1‑206 (MQ=255)
                                                    gATGAACGGGTTGGGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGc                                                                                                                                                                                                                         <  2:795749/185‑1 (MQ=255)
                                                        aaCTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTggg                                                                                                                                                                   <  1:1071221/235‑1 (MQ=255)
                                                            ggTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGATGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTAt                                                                                                                                                                                                                               >  1:82968/1‑171 (MQ=255)
                                                                 tgtgACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGa                                                                                                                                                          >  1:383148/1‑235 (MQ=255)
                                                                   tgACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGc                                                                                                                                                       <  1:687619/236‑1 (MQ=255)
                                                                         ccccGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAgg                                                                                                                                                  <  1:442385/235‑1 (MQ=255)
                                                                         agcccggcttctgggtgctggactggcccctgagcatctgattcacccacaacaaagagaacgagaaaatgcaaacactctcgcagttaccgcctgttcgcccggataccttgcgctgggcaatcttcctcgccgtgctcgggcccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGc                                                                                                                                                                                            <  1:912814‑M2/42‑1 (MQ=255)
                                                                          cccGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAggg                                                                                                                                                 >  1:552072/1‑235 (MQ=255)
                                                                           ccGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCttt                                                                                                                                                                           <  1:1072812/208‑1 (MQ=255)
                                                                           ccGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCAGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGttt                                                                                                                                                                                              >  2:599402/1‑189 (MQ=255)
                                                                              tGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAggg                                                                                                                                                 <  2:891090/231‑1 (MQ=255)
                                                                              tGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAggg                                                                                                                                                 >  1:891093/1‑231 (MQ=255)
                                                                                    tgggtgctggactggaccctgagcatctgattcacccacaacaaagagaacgagaaaatgcaaacactctcgcagttaccgcctgttcgcccggataccttgcgctgggcaatcttcctcgccgtgctcgggcccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTtgtg                                                                                                                                                                     <  2:980218‑M2/65‑1 (MQ=255)
                                                                                       gcggcACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGGGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCt                                                                                                                                                      >  2:902704/1‑217 (MQ=255)
                                                                                             cGAGGTCGAGGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAgg                                                                                                                                                  <  1:36102/215‑1 (MQ=255)
                                                                                                tggaccctgagcatctgattcacccacaacaaagagaacgagaaaatgcaaacactctcgcagttaccgcctgttcgcccggataccttgcgctgggcaatcttcctcgccgtgctcgggcccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTg                                                                                                                                                                                                         <  1:537342‑M2/29‑1 (MQ=255)
                                                                                                     aggACCGGCCCCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCAt                                                                                                                                                                                          <  1:335533/165‑1 (MQ=255)
                                                                                                     aTGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCAttt                                                                                                                                                                                        >  2:488553/1‑169 (MQ=255)
                                                                                                             cACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCcgcg                                                                                                             >  1:1011853/1‑236 (MQ=255)
                                                                                                               ccccGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGtt                                                                                                                                                                                 >  1:35736/1‑166 (MQ=255)
                                                                                                                        cacaacaaagagaacgagaaaatgcaaacactctcgcagttaccgcctgttcgcccggataccttGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCa                                                                                                                                 <  2:980218‑M1/140‑1 (MQ=255)
                                                                                                                        cGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAgg                                                                                                  <  1:641867/236‑1 (MQ=255)
                                                                                                                          ttATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAgg                                                                                                  <  2:550993/234‑1 (MQ=255)
                                                                                                                                      ggggTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCgcgggcg                                                                                                         >  2:853200/1‑215 (MQ=255)
                                                                                                                                            cccccGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGGGCCAGTGCGGCGCTGGGCCCGGGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCg                                                                                               <  1:1089991/219‑1 (MQ=255)
                                                                                                                                              cccGGGGCCGCTGGCTGCTTCCCGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAgg                                                                                                                                                  <  1:138640/166‑1 (MQ=255)
                                                                                                                                               gcaaacactctcgcagttaccgcctgttcgcccggataccttGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGGCCAGTCCAGCACCCAGAAGCCGGGCt                                                                                                                      <  1:912814‑M1/151‑1 (MQ=255)
                                                                                                                                               ccGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGATTGCATTTTCTCGTTCACTTTGTGGTGGGTGAATCAGATGCTCAGGgtccagtcc                                                                                                                                         >  2:411152/1‑174 (MQ=255)
                                                                                                                                                            cagttaccgcctgttcgcccggataccttGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGgtcca                                                                                                                                             <  1:537342‑M1/128‑1 (MQ=255)
                                                                                                                                                                                ggataccttGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCCGCCGGGCAg                                             <  1:780702‑M1/224‑1 (MQ=255)
                                                                                                                                                                                   ggTGCGGCGCTGGGCCCGAGCGCGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAgg                                                                                                                                                  <  2:67493/128‑1 (MQ=255)
                                                                                                                                                                                     tGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTAGCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTGTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTggagcccggct                                           <  2:35735/230‑11 (MQ=255)
                                                                                                                                                                                        ggcgCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCa                                  >  1:655514/1‑236 (MQ=255)
                                                                                                                                                                                          CGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAAc                                <  1:465006‑M1/236‑1 (MQ=255)
                                                                                                                                                                                             TGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCggg                                                <  1:971833‑M1/217‑1 (MQ=255)
                                                                                                                                                                                               GGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAAccc                              <  2:542179‑M1/233‑1 (MQ=255)
                                                                                                                                                                                                  ccGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAgg                                                                                  >  2:980818/1‑178 (MQ=255)
                                                                                                                                                                                                  ccGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGgcgc                                                                               >  2:719900/1‑181 (MQ=255)
                                                                                                                                                                                                  ccGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCcaggc                                                                >  2:807936/1‑196 (MQ=255)
                                                                                                                                                                                                  ccGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGTCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTgcggc                        >  1:574709/1‑236 (MQ=255)
                                                                                                                                                                                                  ccGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTgcg                          >  2:774904/1‑234 (MQ=255)
                                                                                                                                                                                                     agacaggCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGcggcgg                      <  1:994173/230‑1 (MQ=255)
                                                                                                                                                                                                            cGAGGAAGATTGCCCAGGGAAAGGTATCCGGGCGAACGGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCCCCCAGa                                                                                                                               <  2:823330/123‑1 (MQ=255)
                                                                                                                                                                                                             gAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGcc              >  1:402521/1‑235 (MQ=255)
                                                                                                                                                                                                              aGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAg            >  1:724536/1‑236 (MQ=255)
                                                                                                                                                                                                                        cccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGAc  <  1:148701‑M2/228‑1 (MQ=255)
                                                                                                                                                                                                                         ccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCt                             >  2:994170‑M2/8‑208 (MQ=255)
                                                                                                                                                                                                                         ccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGAc  <  1:542182‑M2/228‑1 (MQ=255)
                                                                                                                                                                                                                         ccagcgcAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGAc  <  1:1016384‑M2/228‑1 (MQ=255)
                                                                                                                                                                                                                                |                                                                                                                                                                                                                                   
CGGCTGCGGTGGCGTTGTTCAGCACCAGGCCCGGGGTGGCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCCCGAGCACGGCGAGGAAGATTGCCCAGCGCAAGGTATCCGGGCGAACAGGCGGTAACTGCGAGAGTGTTTGCATTTTCTCGTTCTCTTTGTTGTGGGTGAATCAGATGCTCAGGGTCCAGTCCAGCACCCAGAAGCCGGGCTCCAGCCGCGGGCGGGGCAGGTCGCTGGTGTACAAGGCGCGTTGGTAGTCCAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGAC  >  AE015451/1656501‑1656952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.