Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC	AE015451	1,930,392	Δ63 bp	5.8%		[apeB]	[apeB]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1930391	63 (1.090)	4 (0.070)	4/330	NT	5.8%	intergenic (‑58/+47)	PP_1729/apeB	conserved protein of unknown function/Probable M18 family aminopeptidase 2
	?	AE015451	1930455 =	68 (1.220)					coding (1273/1290 nt)	apeB	Probable M18 family aminopeptidase 2

TCGCGCATGCTGAAGCCGATGGTCAGCAGCATCAGGAACAGGAACACCGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGCTCTGCACCGGTACTTCCTCGGCCATGCACAAGTGGCGGAAGAACCCGGCCGTC  >  AE015451/1930221‑1930687                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         tCGCGCATGCTGAAGCCGATGGTCAGCAGCATCAGGAACAGGAACACCGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCt                                                                                                                                                                                                                                          >  1:359634/1‑235 (MQ=255)                      gTCAGCAGCATCAGGAACAGGAACACCGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTa                                                                                                                                                                                                                      >  2:538985/1‑234 (MQ=255)                      gTCAGCAGCATCAGGAACAGGAACACCGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTAcc                                                                                                                                                                                                                    >  1:317119/1‑236 (MQ=255)                      gTCAGCAGCATCAGGAACAGGAACACCGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTAc                                                                                                                                                                                                                     >  1:527544/1‑235 (MQ=255)                              caTCAGGAACAGGAACACCGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGCACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGa                                                                                                                                                                                                                                  >  2:1020569/1‑214 (MQ=255)                                   ggaacaggaacaCCGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCAc                                                                                                                                                                                                               >  1:2980/1‑228 (MQ=255)                                                  ggACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCCTGGCTGc                                                                                                                                                                                        >  1:241846/1‑236 (MQ=255)                                                   gACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGcc                                                                                                                                                                                       <  1:922115/236‑1 (MQ=255)                                                                 ggAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGa                                                                                                                                                                          <  1:538988/235‑1 (MQ=255)                                                                     aggggACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGa                                                                                                                                                                     <  2:527541/235‑1 (MQ=255)                                                                                aCAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCaa                                                                                                                                                          >  1:914863/1‑236 (MQ=255)                                                                                         cTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGGTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTg                                                                                                                                                                                                         <  2:560851/180‑1 (MQ=255)                                                                                            ttGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCa                                                                                                                                                           >  1:223660/1‑223 (MQ=255)                                                                                                    gggCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGa                                                                                                                                                                     <  2:2980/205‑1 (MQ=255)                                                                                                      gCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTCGAACGCGGTCAGTACCTTCACCAGGGgcg                                                                                                                                                                                                       >  1:277063/1‑169 (MQ=255)                                                                                                       ccATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGa                                                                                                                                                                     >  1:521832/1‑202 (MQ=255)                                                                                                       ccATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCAc                                                                                                                                    >  1:428343/1‑235 (MQ=255)                                                                                                       ccATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGGCATGGCTGc                                                                                                                                                                                        >  1:137122/1‑183 (MQ=255)                                                                                                       aggaacaccgggacgaacggtgacaggaacggggacatggacagcaatccttttgcagtggggccatgtaacaagcatagcgcttgaccaacgaggcgtgattgaccttgagcacgtttaagcaggcgcggcTACGGTAGAAcgcg                                                                                                                                                                                                                             <  1:901898‑M2/14‑1 (MQ=255)                                                                                                              aCAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGa                                                                                                                                                                          <  2:1019859/190‑1 (MQ=255)                                                                                                                      aGCGCTTGACCAGCGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCt                                                                                                                                                                                                                   <  2:934623/141‑1 (MQ=255)                                                                                                                       gcgcTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACCTCAAGGCAGCTCGCGGCTCCGGTAGAACGCGGTCAGTACCTTCACCCggg                                                                                                                                                                                                          >  2:200256/1‑148 (MQ=255)                                                                                                                        cgcgTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTATTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGt                                                                                                                                                                                                                           <  1:1090709/131‑1 (MQ=255)                                                                                                                        cgcTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAgg                                                                                                                                                                                                           >  1:470029/1‑147 (MQ=255)                                                                                                                         gcTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAACGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGtg                                                                                                                  >  1:79527/1‑235 (MQ=255)                                                                                                                              aCCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCg                                                                                                                                                    <  2:554859/196‑1 (MQ=255)                                                                                                                                   cGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGc                                                                                                                                                  <  2:927544/193‑1 (MQ=255)                                                                                                                                     aGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGGCATGGCTGCCACACAGCTCGCGAATGGAGTGCCTTGCAAAGGTCGGCAAACCGATATCCCCCGCGCTCAcccc                                                                                                                        >  1:349843/1‑217 (MQ=255)                                                                                                                                           gATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGt                                                                                                                   >  1:1017467/1‑216 (MQ=255)                                                                                                                                           gATTGACCTTGAGCACGTTTAAGCAGGCACGGCCTGTTCGGGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGt                                                                                                                                                                                                 <  2:582561/138‑1 (MQ=255)                                                                                                                                            aTTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCgg                                                                                                                                                                                                                            <  2:1012670/110‑1 (MQ=255)                                                                                                                                               gACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGAt                                                                                             <  2:428340/234‑1 (MQ=255)                                                                                                                                                   ttGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGa                                                                                       >  1:460816/1‑236 (MQ=255)                                                                                                                                                       gCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAAcgcg                                                                                                                                                                                                                             <  2:578937/98‑1 (MQ=255)                                                                                                                                                       gCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGACTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAg                                                                                      >  2:466562/1‑233 (MQ=255)                                                                                                                                                        cACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCCACGGGAGAACGCGGCCAGGACCTTCACCAGGAGCGCCAGGTCATGGCTGCCACACAGCTCGCGAAGGGa                                                                                                                                                                     >  2:278790/1‑153 (MQ=255)                                                                                                                                                          cGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTACACCAGGTGCGCCCGGTCATGGCTGCcaca                                                                                                                                                                                    >  1:200462/1‑136 (MQ=255)                                                                                                                                                             ttAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCcacaca                                                                                                                                                                                  <  2:869038/135‑1 (MQ=255)                                                                                                                                                              tAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCa                                                                                                                                                                                                                         <  1:719030/95‑1 (MQ=255)                                                                                                                                                              tAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCa                                                                                                                                                                                                                         >  2:719027/1‑95 (MQ=255)                                                                                                                                                              tAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGt                                                                                                                                                                                                 <  1:982338/119‑1 (MQ=255)                                                                                                                                                                   gggccatgtaacaagcatagcgcttgaccaacgaggcgtgattgaccttgagcacgtttaagcaggcgcggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGc                                                                                                                                                  <  1:728126‑M2/89‑1 (MQ=255)                                                                                                                                                                   gggccatgtaacaagcatagcgcttgaccaacgaggcgtgattgaccttgagcacgtttaagcaggcgcggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGc                                                                                                                                                  >  2:728123‑M2/73‑161 (MQ=255)                                                                                                                                                                   aGGCGCGGCTTGTTCGCGGCGTCGAGCCGCCGCGAACAGGCCGTGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAAcgcg                                                                                                                                                                                                                             <  2:738114/86‑1 (MQ=255)                                                                                                                                                                   aGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGCTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTc                                                                        <  1:1029765/235‑1 (MQ=255)                                                                                                                                                                   aGGCGCGGCCTGGTCGAGCCGGCGAACCGCCGTGAACAGGCCGCGCCGGGTTACATCAAGGCAGGTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACGAGGTGTGCCAGGTGATGGCTGCGATACAGGTATCGAATGGAGTGCATGGCAAAGGTCGGCAAAcc                                                                                                                                             <  1:1043802/166‑1 (MQ=255)                                                                                                                                                                        cgGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGc                                                                               >  1:1040297/1‑223 (MQ=255)                                                                                                                                                                        cgGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTgcg                                                                  >  1:469929/1‑236 (MQ=255)                                                                                                                                                                                     gcggcgCACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGt                                                                                                                                                                                                 <  2:143193/96‑1 (MQ=255)                                                                                                                                                                                     gCGTCGAACCGCCGCGAACAGGTCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCcacaca                                                                                                                                                                                  <  1:40238/111‑1 (MQ=255)                                                                                                                                                                                      tctaccgtagccgcGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGctc                                                     >  1:361090/10‑235 (MQ=255)                                                                                                                                                                                        tCGAACCTCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAAcgcg                                                                                                                                                                                                                             <  2:706080/65‑1 (MQ=255)                                                                                                                                                                                         cGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATc                                                                                                                                       <  1:1050647/150‑1 (MQ=255)                                                                                                                                                                                           agccgccgCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGt                                                                                                                                                                                                 <  2:200460/88‑1 (MQ=255)                                                                                                                                                                                           aaCCGCCGCGAACGGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTg                                                                                                                                                                                                         <  2:263457/82‑1 (MQ=255)                                                                                                                                                                                           aaCCGCCACGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAg                                                                                      <  1:50331/197‑1 (MQ=255)                                                                                                                                                                                            aCCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGt                                                                                                                                 <  1:311982/153‑1 (MQ=255)                                                                                                                                                                                            aCCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGCTCTGCAcc                                               >  2:790648/1‑235 (MQ=255)                                                                                                                                                                                             ccgccgCGAACGCGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCAc                                                                                                                                    <  2:278741/149‑1 (MQ=255)                                                                                                                                                                                             ccgccgCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTCCCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAg                                                                                      <  1:323955/195‑1 (MQ=255)                                                                                                                                                                                              cgcggcGCACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCcacaca                                                                                                                                                                                  <  1:816561/102‑1 (MQ=255)                                                                                                                                                                                              cgccgcGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGcacc                                                              <  1:270134/218‑1 (MQ=255)                                                                                                                                                                                                 cgcgAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGcc                                                                                    <  1:1036357/193‑1 (MQ=255)                                                                                                                                                                                                 cgcgAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGcacc                                                              <  1:533893/215‑1 (MQ=255)                                                                                                                                                                                                   cgAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGACTGGAGTGCATGGCAAAGGGCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGCTCgg                                                                                                   >  2:44153/1‑176 (MQ=255)                                                                                                                                                                                                     aaCAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGc                                                                                                                                                  >  1:690225/1‑127 (MQ=255)                                                                                                                                                                                                     aaCAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGc                                                                                                                                                  <  2:690222/127‑1 (MQ=255)                                                                                                                                                                                                      gcgtgattgaccttgagcacgtttaagcaggcgcggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGCTCTGCAcc                                               <  1:510027‑M2/188‑1 (MQ=255)                                                                                                                                                                                                          gCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTc                                                                        <  1:479687/196‑1 (MQ=255)                                                                                                                                                                                                                ccggCTTACAGCAAGGCAGCTGGCGGCTACGGTAGACCGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACaa                                                          <  2:317116/201‑1 (MQ=255)                                                                                                                                                                                                                 cTGCTAACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGcacc                                                              <  2:918045/199‑1 (MQ=255)                                                                                                                                                                                                                    cTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGcacc                                                              <  1:200258/196‑1 (MQ=255)                                                                                                                                                                                                                       aCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCa                                                                                                                      >  2:245184/1‑137 (MQ=255)                                                                                                                                                                                                                                cAGCTCGCGGCTACGGTAGAGCGCGGTCAGTACCTTCAACAGGTGCGCCAGGTCATGGCTGCCACAGAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCa                                                                                                                                     <  2:87072/113‑1 (MQ=255)                                                                                                                                                                                                                                cAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGCTCTGCACCGGTACTTCCTCGGCCATGca                           >  2:915090/1‑219 (MQ=255)                                                                                                                                                                                                                                 aGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGACTGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTgc                                                                                                                               >  2:402480/1‑118 (MQ=255)                                                                                                                                                                                                                                 aGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAg                                                                                                                                                                    >  1:558924/1‑81 (MQ=255)                                                                                                                                                                                                                                 aGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAg                                                                                                                                                                    <  2:558921/81‑1 (MQ=255)                                                                                                                                                                                                                                 aGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGCTCTGCACCGGTACTTCCTCGGCCATGCACAAGTGGCGGAAGAAccc         >  2:542923/1‑236 (MQ=255)                                                                                                                                                                                                                                      gcggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGcc                                                                                                 >  2:182116‑M2/6‑143 (MQ=255)                                                                                                                                                                                                                                      gcggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCgcaccc                                                             >  2:912889‑M2/6‑178 (MQ=255)                                                                                                                                                                                                                                       cggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGcc                                                                                                 <  2:470026‑M2/138‑1 (MQ=255)                                                                                                                                                                                                                                        ggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGcacc                                                              <  2:530287‑M2/173‑1 (MQ=255)                                                                                                                                                                                                                                        ggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGCTCTGCACCGGTACTTCCTCGGCCATGCACAAg                       >  1:823438‑M2/4‑215 (MQ=255)                                                                                                                                                                                                                                        ggcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGCTCTGCACCGGTACTTCCTCGGCCATGCACAAGTGGCGGAAGAACCCGGCCGtc  <  1:154632‑M2/233‑1 (MQ=255)                                                                                                                                                                                                                                         gcTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGc                                                       <  2:44281‑M2/180‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         TCGCGCATGCTGAAGCCGATGGTCAGCAGCATCAGGAACAGGAACACCGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCGGTGATCGGCCCGATGGTCGAGCCACAGCCCATGTCGCTGCGCACCACAAAGCTCTGCACCGGTACTTCCTCGGCCATGCACAAGTGGCGGAAGAACCCGGCCGTC  >  AE015451/1930221‑1930687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.