Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	2095107	2095331	225	18 [17]	[17] 19	[alaA]	[alaA]

AGCACCACCGCGAGGTTGGTGGCTACAAACAACAGAATGCGCATCATGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTGCGCCCCACCACCACCCCCGCGTCG  >  AE015451/2094903‑2095231                                                                                                                                                                                                            |                                                                                                                              aGCACCACCGCGAGGTTGGTGGCTACAAACAACAGAATGCGCATCATGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTc                                                                                                    <  2:1029436/231‑1 (MQ=255)       accGCGAGGTTGGTGGCTACAAACAACAGAATGCGCATCATGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTggg                                                                                                             <  2:419757/216‑1 (MQ=255)             aGGTTGGTGGCTACAAACAACAGAATGCGCATCATGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTc                                                                                                    <  2:691903/219‑1 (MQ=255)                                           atcatGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATc                                                      >  1:740981/1‑235 (MQ=255)                                                              ccTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGggcggc                                    <  2:740978/234‑1 (MQ=255)                                                                  aCGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCg                                                                                                      <  2:871340/164‑1 (MQ=255)                                                                         aGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGc                                                                              <  1:760872/181‑1 (MQ=255)                                                                                gCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGc                                                                              <  2:311508/174‑1 (MQ=255)                                                                                      ttcGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACGATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTa                                                                                                                               <  2:302364/117‑1 (MQ=255)                                                                                        cGGGGTGTATAGGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGc                                                                <  2:123335/180‑1 (MQ=255)                                                                                          gcgTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACa                                                                                                                        <  1:155685/120‑1 (MQ=255)                                                                                                   aGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAGACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGAt                             <  2:388526/204‑1 (MQ=255)                                                                                                            ccGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCa                                                                             <  1:361484/147‑1 (MQ=255)                                                                                                                       cAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATc                                                      <  2:521569/159‑1 (MQ=255)                                                                                                                                            cTGTGTACGGCGGAGGATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGggcggc                                    <  2:94705/156‑1 (MQ=255)                                                                                                                                                   cggcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAgtg                                                                         <  2:165295/112‑1 (MQ=255)                                                                                                                                                   cggcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAgtg                                                                         >  1:165297/1‑112 (MQ=255)                                                                                                                                                                     gATGGCGTGGGGGCTGTGGGATAGAGGGTTGCAGGATGTAGGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTGCGCCCCACCACCACCCCCGCGTCg  <  1:788109/165‑1 (MQ=255)                                                                                                                                                                                                            |                                                                                                                              AGCACCACCGCGAGGTTGGTGGCTACAAACAACAGAATGCGCATCATGGTTGTTACGTTCTCCTGACGGATGAGTTGTCGCTTACTGCGGGGTATATAAGGGGCCTGCCGCGCCGATTCAATCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTGCGCCCCACCACCACCCCCGCGTCG  >  AE015451/2094903‑2095231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑