Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	3848803	3849070	268	18 [16]	[17] 21	PP_3397	conserved exported protein of unknown function

GCCGAAACCTCGATACCACAAGTCGGTAACAGCGGATATGAGCTGGAGGTCTACGTTGCCGGTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCGGGACATCGGTATCGGCGCTCCGGGCAACTTCCAGGGGGCGCTGGCGGGGGC  >  AE015451/3848587‑3848873                                                                                                                                                                                                                        |                                                                        gCCGAAACCTCGATACCACAAGTCGGTAACAGCGGATATGAGCTGGAGGTCTACGTTGCCGGTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCAcc                                                       <  2:778950/234‑1 (MQ=255)                         ggTAACAGCGGATATGAGCTGGAGGTCTACGTTGCCGGTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCGGGACATCGGTATCGGCGCTCCgg                              <  1:794160/235‑1 (MQ=255)                         ggTAACAGCGGATATGAGCTGGAGGTCTACGTTGCCGGTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCGGGACATCGGTATCGGCGCTCCg                               <  2:358289/234‑1 (MQ=255)                                  ggATATGAGCTGGAGGTCTACGTTGCCGGTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCggg                                                   >  2:888090/1‑205 (MQ=255)                                  ggATATGAGCTGGAGGTCTACGTTGCCGGTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCggg                                                   <  1:888093/205‑1 (MQ=255)                                                  tCTACGTTGCCGGTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACAGGGTGGAGACGGTCAACGTCACCACGGCAGgtcgtc                                                                        <  2:141471/168‑1 (MQ=255)                                                              gTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGgtcgt                                                                         >  1:725562/1‑155 (MQ=255)                                                              gTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGgtcgt                                                                         <  2:725559/155‑1 (MQ=255)                                                                            tttGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCGGGACATCGGTATCGGCGCTCCg                               <  2:895774/183‑1 (MQ=255)                                                                            tttGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCGGGACATCGGTATCGGCGCTCCg                               >  1:895777/1‑183 (MQ=255)                                                                            tttGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCGGGACATCGGTATCGGCGCTCCGGGCAAc                         >  1:488568/1‑189 (MQ=255)                                                                            tttGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCGGGACATCGGTATCGGCGCTCCGGGCAAc                         <  2:488565/189‑1 (MQ=255)                                                                              tgctgcTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCGGGACATCGGTa                                          <  1:990113/170‑1 (MQ=255)                                                                                                                                                                                  tACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATc                                                                >  2:343299/1‑48 (MQ=255)                                                                                                                                                                                  tACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATc                                                                <  1:343302/48‑1 (MQ=255)                                                                                                                                                                                     ggggTGGGGACGGTCAGCGTCGCCACGGCAGGTCGGCGCGCGATCAACATCACCCGGGACATCGGTATCGGCGCTCCGGGCAACTTCCAGGGGGCGCTGGCGGGGGc  <  2:306349/107‑1 (MQ=255)                                                                                                                                                                                            agaCGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCa                                                               <  2:572067/39‑1 (MQ=255)                                                                                                                                                                                            agaCGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCa                                                               >  1:572070/1‑39 (MQ=255)                                                                                                                                                                                                                        |                                                                        GCCGAAACCTCGATACCACAAGTCGGTAACAGCGGATATGAGCTGGAGGTCTACGTTGCCGGTATAGAGGCAGCCTTTGCTGCTGAAAACCCGGTAGACGGTGATCAGCAAAGTTTCGCCCGCATCCGTATCCGCGCATCGGTCCCACGCACCGGTACCTACACCATCACGCACCCTTACGGGGTGGAGACGGTCAACGTCACCACGGCAGGTCGTCGCGCGATCAACATCACCCGGGACATCGGTATCGGCGCTCCGGGCAACTTCCAGGGGGCGCTGGCGGGGGC  >  AE015451/3848587‑3848873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑