Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	2478330	2478550	221	19 [17]	[17] 20	PP_2172	conserved exported protein of unknown function

GGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGATTTGA  >  AE015451/2478478‑2478752                                                                          |                                                                                                                                                                                                          ggTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGTCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCGCAGc                                           >  1:188378/1‑234 (MQ=255) ggTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCaa                                         >  1:676940/1‑236 (MQ=255) ggTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGGAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGGCGCTCACTCCAAGGACACTCGCGGtt                                                                                                         >  1:155741/1‑172 (MQ=255)   tGGCATGGGAGGGGATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGGTGGAAAGGCGACACGCGAGCAAGGGGTAAGCggga                                                                                                                                                                                             >  2:213823/1‑84 (MQ=255)      cATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCt                                     >  1:3381/1‑235 (MQ=255)        tGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGGAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGc                                                                        >  1:235011/1‑198 (MQ=255)                  tAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCCCTCCa                                                                                                                        >  2:76896/1‑140 (MQ=255)                  tAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGtctt                           >  2:920418/1‑233 (MQ=255)                            gggAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCt                                     >  2:873941/1‑213 (MQ=255)                                aGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGCAAGGCCTCAGCAAc                                        >  1:953486/1‑206 (MQ=255)                                  ggCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCg                                                                                                                                                                                                >  1:842540/1‑52 (MQ=255)                                      ttGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGAttt    <  1:873944/236‑1 (MQ=255)                                                       ggAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAACAAATGATCGATGAtt     >  2:462696/1‑218 (MQ=255)                                                       ggAAAGGCGACACGCGATCAT‑GGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGACTTCTTCaaaa                   >  1:293063/1‑203 (MQ=255)                                                                     cgATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCt                                                                                                                                          >  2:89798/1‑71 (MQ=255)                                                                     cgATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGAt             <  1:739483/196‑1 (MQ=255)                                                                     cgATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGAt             >  2:739480/1‑196 (MQ=255)                                                                          aTGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGAttt    <  2:512374/200‑1 (MQ=255)                                                                          aTGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGAttt    >  1:512377/1‑200 (MQ=255)                                                                          aTGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGGCTTCTTCAAAAAATGATCGATGATTTGa  >  2:149263/1‑202 (MQ=255)                                                                          |                                                                                                                                                                                                          GGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGTGATCACGCTGGAAAGGCGACACGCGATCATGGGGTAAGCGGCAATCATTACGGAAGCTCGCGCAACAGCGACAACGGTCATGGCACCACCACCTCGGGTGTCGCTCACTCCAAGGACACTCGCGGTTTGGCCAAGTCCACGGCCATCTCTGGAACGACGCCAGGCGATCATAATTCGAAAGGCCTCAGCAACGCTGTCGGGTCTTCTTCAAAAAATGATCGATGATTTGA  >  AE015451/2478478‑2478752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑