| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 214,075 | G→A | 6.9% | P6527P (CCG→CCA) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 214,075 | 0 | G | A | 6.9% | 221.7 / 3.5 | 71 | P6527P (CCG→CCA) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base G (27/39); new base A (2/3); total (29/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATC > AE015451/213849‑214291 | cacTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACAcc < 1:539373/233‑1 (MQ=255)cacTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACAcc > 2:539370/1‑233 (MQ=255) ggACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACGGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACAccc < 2:467136/229‑1 (MQ=2) cccGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAgg > 1:954695/1‑234 (MQ=255) cccGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCg < 1:731340/236‑1 (MQ=255) cGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGAt < 1:680075/236‑1 (MQ=255) ggTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACg < 1:55906/236‑1 (MQ=255) ggTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACg < 1:794260/236‑1 (MQ=255) gtaaCCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCg < 1:883202/217‑1 (MQ=255) cgacgaGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATg < 2:925696/233‑1 (MQ=255) gacgaGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGTCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGc < 2:664122/233‑1 (MQ=255) gCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCg > 2:804601/1‑209 (MQ=255) gTACCCCAGGCAACGAAGGCGACCCGGTAAAGGCCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGc < 1:308138/236‑1 (MQ=255) aCCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGc > 2:451889/1‑234 (MQ=255) aCGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAg < 1:243954/189‑1 (MQ=255) ggCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCCCGCCGTACAcc > 2:443629/1‑171 (MQ=39) ccGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGAc < 1:49269/186‑1 (MQ=40) cAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCg < 1:145962/176‑1 (MQ=39) aaGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCAc > 1:709353/1‑236 (MQ=255) aCCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCATCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATTAATTcggcag > 2:938765/1‑218 (MQ=11) cATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGc < 2:530445/225‑1 (MQ=255) cccgccgACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt < 1:146566/235‑1 (MQ=255) aCCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt < 1:804604/236‑1 (MQ=255) cgccgACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCt < 2:1034498/229‑1 (MQ=255) cgccgACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt < 2:948255/234‑1 (MQ=255) gccgACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACCATGCTGGCCAGATCAGCCTggcc > 1:883173/1‑196 (MQ=255) cgACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCgaga < 1:436883/236‑1 (MQ=255) gaccgggTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACAtt > 2:645176/6‑224 (MQ=255) aCCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGGGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTc < 1:109262/225‑1 (MQ=255) cTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCCCGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCa < 2:137319/174‑1 (MQ=255) gCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCGGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGggtg > 1:952879/1‑235 (MQ=255) cGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGggtgg < 2:954692/234‑1 (MQ=255) aaCCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGtt < 1:675483/236‑1 (MQ=255) tCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGAcgc < 2:791030/112‑1 (MQ=39) tCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGAcgc > 1:791033/1‑112 (MQ=39) cACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGt > 2:234150/1‑171 (MQ=255) tgtgCACGCCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGCGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGAGCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCg < 2:821518/179‑1 (MQ=255) tgCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGacac < 1:558479/235‑1 (MQ=255) aCGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGaca > 2:488130/1‑231 (MQ=255) aCGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCGGGCCAGATCAGc > 2:882739/1‑143 (MQ=255) gTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACcg < 1:451892/235‑1 (MQ=255) aaCCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCg < 2:441102/169‑1 (MQ=255) cAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTAACCATCAAGGCCGGCCAAACCAGCGCGCCGTACACCCACGACGCGACAGGAGATGCCGTCTACacc > 2:512123/1‑115 (MQ=11) gCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTa > 2:443451/1‑170 (MQ=255) gCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTgg > 1:504618/1‑236 (MQ=255) cccACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACcg > 1:146031/1‑219 (MQ=255) aCCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCGGGCCAGATCAGCCTGGGCATCAAGTCCGCGGTGGAc > 1:1074796/1‑143 (MQ=255) ccggTCGTGACCCCGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGacac < 1:147352/204‑1 (MQ=255) cTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGAt < 1:93603/87‑1 (MQ=38) cTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGAt > 2:93601/1‑87 (MQ=38) cGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGCGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGAccc > 1:330808/1‑236 (MQ=255) caacaaCGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCACGTCAGCGGTAGACGCAACCg > 2:905814/1‑131 (MQ=255) cGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAg > 1:870043/1‑59 (MQ=255) cGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAg < 2:870040/59‑1 (MQ=255) gCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAgg < 1:645179/233‑1 (MQ=255) cccAGGTCACCATCAAGGCCGGCGAAACCACCGCGCCGTACACCCACGACGCGCAAGCCGATGACGTCTACAACGGTGCTGGCCAGATCAGCCTGAGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGTGAACCTGGAACTGGGTGGTGc > 1:360671/1‑157 (MQ=255) ccAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGgcggcg < 1:966129/236‑1 (MQ=255) gTCACCATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCCGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAAc < 1:418911/221‑1 (MQ=255) atcATCAAGGCTGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGggtg > 2:699382/3‑145 (MQ=255) aCCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTcggcg > 2:290612/1‑102 (MQ=255) cATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCt < 1:37758/236‑1 (MQ=255) ccGGCGAAACCAGCGCGCCATACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATc < 1:74831/236‑1 (MQ=255) tggCGAAACCAGCGCGCCATACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGgcggcg < 1:699385/217‑1 (MQ=255) cGGCGAAACCAGCGCGACGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATc < 1:702474/235‑1 (MQ=255) gAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACt < 1:296458/125‑1 (MQ=255) gAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACt > 2:296455/1‑125 (MQ=255) gAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGAt > 1:431519/1‑218 (MQ=255) gAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCCACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTcg > 1:817739/1‑84 (MQ=255) gcgcCGTACACCCACGCCGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGAc < 2:515826/176‑1 (MQ=255) gcgcCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCtt < 2:709350/187‑1 (MQ=255) cGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAggcggc < 2:831981/200‑1 (MQ=255) | CACTCGACAAGACCCCGGTCAGCACTTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCCGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAATTCGGCGGTAGACGCCACCGGCGCTACATTCGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATC > AE015451/213849‑214291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |