New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 612009	NA (NA)	4 (0.110)	3/314	NT	NA	coding (906/966 nt)	PP_0526	transposase
	?	AE015451	= 612012	NA (NA)					coding (909/966 nt)	PP_0526	transposase

CCTTTGTCGCTTATCTAGGCATGGATGTAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/611765‑612009 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgatgCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTGATGGGCGTAATACTGCTTCCAGGTCGCGGTTCGACTGCCGCTCATCGAGGCGTTGTACAGGAGTCTACGGACCTCCGAGTCTCCGCGCTTGCTCAACTTCCCTCTGCCTGCCCATTTACCGGATTGGGAAACCGTTACA  <  AE015451/612012‑611790                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCTTTGTCGCTTATCTAGGCATGGATGTAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTC                                                                                                                                                                                                                                          <  1:344160/236‑1       TCGCTTATCTAGGCATGGATGTAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTG                                                                                                                                                                                                                                    <  1:738471/236‑1         GCTTATCTAGGCATGGATGTAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTG                                                                                                                                                                                                                                    <  1:374657/234‑1            TATCTAGGCATGGATGTAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTG                                                                                                                                                                                                                                    <  1:582040/231‑1                     ATGGATGTAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTGATGCCTCATCAGG                                                                                                                                                                                                                       <  1:737383/235‑1                            TAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTGATGC                                                                                                                                                                                                                                >  2:737382/1‑219                                GGTTTCCCAATCCGGTAAATGGGCAGGCAGAGAGCAGCTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCAGGAAGCTGTATTACGCGCAGCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTGgc                                                                                                                                                                                                                                  >  2:707156/1‑211                                      CCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTG                                                                                                                                                                                                                                    >  2:259169/1‑205                                                                               tCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTGAT                                                                                                                                                                                                                                  <  1:60122/165‑1                                                                                                           GTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGAGATCCGTGCACGTAGCTTGGCTCGGCTGGCCTCCGGCCCGATG                                                                                                                                                                                                                                 >  1:216400/1‑139                                                                                                                      CGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGG                                                                                                                                                                                                                                        >  1:551622/1‑121                                                                                                                      CGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGG                                                                                                                                                                                                                                        <  2:551621/121‑1                                                                                                                                CAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCACTTGGCTCGGCTGGCCTTCGGCCTGA                                                                                                                                                                                                                                   >  1:316286/1‑116                                                                                                                                                                                                                      GTCGCTTGGCTCGGCTGGCCTTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTC                                                                                                                                                           >  2:602835/1‑102                                                                                                                                                                                                                      GTCGCTTGGCTCGGCTGGCCTTCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTC                                                                                                                                                           <  1:602836/102‑1                                                                                                                                                                                                                      GTCGCTTGGCTCGGCTGGCCTTCGGCCTGATGCCTCATCAGGCC                                                                                                                                                                                                                     >  1:488311/1‑44                                                                                                                                                                                                                                          ggCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGGCGTGCAAGGATCGCCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGT                                                                                                                                              <  2:168498/93‑1                                                                                                                                                                                                                                           gCGGCCGGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTGATGGGCGTAATACTGCTTCCAGGTCGCGGTTCGACTGCCGCTCATCG                                                                                              <  2:236210/141‑1                                                                                                                                                                                                                                           TCGGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTGATGGGCGTAATACTGCTTCCAGGTCGCGGTTCGACTGCCGCTCATCGAGGCGTTGTACAGGAGTCTACGGACCTCCGAGTCTCCGCGCTTGCTCAACTTCCCTCTGCCTGCCCATTTACCGGATTGGGAAACCGTTAC   <  2:511911/233‑1                                                                                                                                                                                                                                             GGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTGATGGGCGTAATACTGCTTCCAGGTCGCGGTTCGACTGCCGCTCATCGAGGCGTTGTACAGGAGTCTACGGACCTCCGAGTCTCCGCGCTTGCTCAACTTCCCTCTGCCTGCCCATTTACCGGATTGGGAAACCGTTACA  <  2:523367/232‑1                                                                                                                                                                                                                                             GGCCTGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGCGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTGATGGGCGTAATACTGCTTCCAGGTCGCGGTTCGACTGCCGCTCATCG                                                                                              <  2:564147/140‑1                                                                                                                                                                                                                                             GGCCTGATGCATCAGCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTGATGGGCGTAATACTGCTTCCAGGTCGCGGTTCGACTGCCGCTCATCGAGGCGTTGTACAGGAGTCTACGGACCTCCGAGTCTCCGCGCTTGCTCAACTTCCCTCT                                    <  1:747067/198‑1                                                                                                                                                                                                                                                 TGATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTGATGGGCGTAATACTGCTTCCAGGTCGCGGTTCGACTGCCGCTCATCGAGGCGTTGTACAGGAGTCTACGGACCTCCGAGTCTCCGCGCTTGCTCAACTTCCCTCTGCCTGCCCATTTACCGGATTGGGAAACCG       <  2:658709/223‑1                                                                                                                                                                                                                                                  GATGCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTGATGGGCGTAATACTGCTTCCAGGTCGCGGTTCGACTGCCGCTCATCGAGGCGTTGGACAGGAGTCTACGGAa                                                                     >  2:146908/1‑159                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCTTTGTCGCTTATCTAGGCATGGATGTAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/611765‑612009 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgatgCCTCATCAGGCCGAAGGCCAGCCGAGCCAAGCGACGTGCAAGGATCACCAAGGCTTGAGTGGTTTTCTTCCCCCGGGCTTGGTGATGGGCGTAATACTGCTTCCAGGTCGCGGTTCGACTGCCGCTCATCGAGGCGTTGTACAGGAGTCTACGGACCTCCGAGTCTCCGCGCTTGCTCAACTTCCCTCTGCCTGCCCATTTACCGGATTGGGAAACCGTTACA  <  AE015451/612012‑611790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.