New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 631260 | 35 (0.880) | 6 (0.160) | 6/318 | NT | 14.4% | coding (433/1449 nt) | PP_0544 | Ethanolamine transporter |
? | AE015451 | = 631305 | 38 (1.000) | coding (388/1449 nt) | PP_0544 | Ethanolamine transporter |
TGCCCACACGCCGACATAGCCGAACGGCAGGAAGCTGCTGGCGCCGACGGCGTCCGTTTTGGCGATGTCGAACAGGTTGGCTGCATCAAAATGGGGCACCATGCCTATCAGGAATACGGCCAGGGCAATGGCGGCGATGGCGGTGATGATGAACATCAGCTTCAGTGCCTCACCCACGCCGAAAATGTGGATGCTGATGAACACGATGTAGAACGCCAGGTAGATCATCCAGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/631024‑631260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagccgccATCGCGGTGTTCATCGGCGCCTACTGCCAATCGCTGTTCGGTATCGGCGGCTGGATGATCTACCTGGCGTTCTACATCGTGTTCATCAGCATCCACATTTTCGGCGTGGGTGAGGCACTGAAGCTGATGTTCATCATCACCGCCATCGCCGCCATTGCCCTGGCCGTATTCCTGATAGGCATGGTGCCCCATTTTGATGCAGCCAACCTGTTCGACATCGCCAAAACG < AE015451/631305‑631078 TGCCCACACGCCGACATAGCCGAACGGCAGGAAGCTGCTGGCGCCGACGGCGTCCGTTTTGGCGATGTCGAACAGGTTGGCTGCATCAAAATGGGGCACCATGCCTATCAGGAATACGGCCAGGGCAATGGCGGCGATGGCGGTGATGATGAACATCAGCTTCAGTGCCTCACCCACGCCGAAAATGTGGATGCTGATGAACACGATGTAGAACGCCAGGTAGATCATCCAGCCGC > 1:622660/1‑236 CACACGCCGACATAGCCGAACGGCAGGAAGCTGCTGGCGCCGACGGCGTCCGTTTTGGCGATGTCGAACAGGTTGGCTGCATCAAAATGGGGCACCATGCCTATCAGGAATACGGCCAGGGCAATGGCGGCGATGGCGGTGATGATGAACATCAGCTTCAGTGCCTCACCCACGCCGAAAATGTGGATGCTGATGAACACGATGTAGAACGCCAGGTAGATCATCCAGCCGCCA < 2:635883/234‑1 CTTCAGTGCCTCACCCACGCCGAAAATGTGGATGCTGATGAACACGATGTAGAACGCCAGGTAGATCATCCAGCCGCCATCGCGGTGTTCATCGGCGCCTACTGCCAATGGCTGTTCGGTATCGG > 2:471293/1‑125 GAACACGATGTAGAACGCCAGGTAGATGATCCAGCCGCCATCGCGGTGTTCATCGGCGCCTACTGCTAATCGCTGTTCGGTGTCGGCGGCTGGCTGATCTACCTGGCGCTCTCCATCGT > 1:603201/1‑119 AGAACGCCAGGTAGATCATCCAGCCGCCATCGCGGTGTTCATCGGCGCCTACTGCCAATCGCTGTTCGGTATCGGCGGCTGGATGATCTACCTGGCGTTCTACATCGTGTTCATCAGCGTCCACATTTTCGGCGTGGGTGAGGCAGTGAAGCTGATGTTCATCATCACCGCCATCGCCGCCATTGCCCTGGCCGTct > 1:653976/1‑195 GTAGATCATCCAGCCGCCATCGCGGTGTTCATCGGCGCCTACTGCCAATCGCTGTTCGGTATCGGCGGCTGGATGATCTACCTGGCGTTCTACATCGTGTTCATCAGCATCCACATTTTCGGCGTGGGTGAGGCACTGAAGCTGATGTTCATCATCACCGCCATCGCCGCCc > 1:259911/1‑171 AGATCATCCAGCCGCCATCGCGGTGTTCATCGGCGCCTACTGCCAATCGCTGTTCGGTATCGGCGGCTGGATGATCTACCTGGCGTTCTACATCGTGTTCATCAGCATCCACATTTTCGGCGTGGGTGAGGCACTGAAGCTGATGTTCATCATCACCGCCATCGCCG < 1:530281/167‑1 AGATCATCCAGCCGCCATCGCGGTGTTCATCGGCGCCTACTGCCAATCGCTGTTCGGTATCGGCGGCTGGATGATCTACCTGGCGTTCTACATCGTGTTCATCAGCATCCACATTTTCGGCGTGGGTGAGGCACTGAAGCTGATGTTCATCATCACCGCCATCGCCG > 2:530280/1‑167 CAGCCGCCATCGCGGTGTTCATCGGCGCCTACTGCCAATCGCTGTTCGGTATCGGCGGCTGGATGATCTACCTGGCGTTCTACATCGTGTTCATCAGCATCCACATTTTCGGCGTGGGTGAGGCACTGAAGCTG < 2:728413/134‑1 GCCGCCATCGCGGTGTTCATCGGCGCCTACTGCCAATCGCTGTTCGGTATCGGCGGCTGGATGATCTACCTGGCGTTCTACATCGTGTTCATCAGCATCCACATTTTCGGCGTGGGTGAGGCACTGAAGCTGATGTTCATCATCACCGCCATCGCCGCCATTGCCCTGGCCGTATTCCTGATAGGCATGGTGCCCCATTTTGATGCAGCCAACCTGTTCGACATCGCCAAAACG > 2:268541/1‑234 TGCCCACACGCCGACATAGCCGAACGGCAGGAAGCTGCTGGCGCCGACGGCGTCCGTTTTGGCGATGTCGAACAGGTTGGCTGCATCAAAATGGGGCACCATGCCTATCAGGAATACGGCCAGGGCAATGGCGGCGATGGCGGTGATGATGAACATCAGCTTCAGTGCCTCACCCACGCCGAAAATGTGGATGCTGATGAACACGATGTAGAACGCCAGGTAGATCATCCAGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/631024‑631260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagccgccATCGCGGTGTTCATCGGCGCCTACTGCCAATCGCTGTTCGGTATCGGCGGCTGGATGATCTACCTGGCGTTCTACATCGTGTTCATCAGCATCCACATTTTCGGCGTGGGTGAGGCACTGAAGCTGATGTTCATCATCACCGCCATCGCCGCCATTGCCCTGGCCGTATTCCTGATAGGCATGGTGCCCCATTTTGATGCAGCCAACCTGTTCGACATCGCCAAAACG < AE015451/631305‑631078 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |