New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1479077	50 (1.250)	3 (0.080)	3/314	NT	5.8%	coding (141/471 nt)	moaC	Cyclic pyranopterin monophosphate synthase accessory protein
	?	AE015451	= 1479089	50 (1.340)					coding (153/471 nt)	moaC	Cyclic pyranopterin monophosphate synthase accessory protein

AGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACGGCGAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1478836‑1479077 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgaacacGTCACCCTTGGGGTGTTCGCCGTCGACGATCATCTGCAAGGTCTGCGGCAACATGCGCACCCGCGCCTCGGCGGTAGCCTCGCGCTCGGTCACGGCCTTTTCAGTGACGTCGA  <  AE015451/1479089‑1478977                                                                                                                                                                                                                                                                                                                                                                     AGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACGGC                                                                                                                         <  1:266054/236‑1                                                        TGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACag                                                                                                                          >  2:531644/1‑178                                                                                                                    TGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACGGC                                                                                                                         >  1:348023/1‑121                                                                                                                    TGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACGGC                                                                                                                         <  2:348022/121‑1                                                                                                                                                                                  CTACTGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACGGC                                                                                                                         >  2:655327/1‑59                                                                                                                                                                                                         ATGTTGCCGCAGACCTTGCAGATGATCGTCGACGGCGAACACGTCACCCTTGGGGT                                                                                                     >  1:43586/1‑56                                                                                                                                                                                                         ATGTTGCCGCAGACCTTGCAGATGATCGTCGACGGCGAACACGTCACCCTTGGGGT                                                                                                     <  2:43586/56‑1                                                                                                                                                                                                                            AGATGATCGTCGACGGCGAACACGTCACCCTTGGGGTGTTCGCCGTCGACGATCATCTGCAAGGTCTGCGGCAACATGCGCACCCGCGCCTCGGCGGTAGCCTCGCGCTCGGGCACGGCCTTTTCAGTGGCGGCGA  >  1:84526/1‑136                                                                                                                                                                                                                                                                                                                                                                     AGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACGGCGAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1478836‑1479077 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgaacacGTCACCCTTGGGGTGTTCGCCGTCGACGATCATCTGCAAGGTCTGCGGCAACATGCGCACCCGCGCCTCGGCGGTAGCCTCGCGCTCGGTCACGGCCTTTTCAGTGACGTCGA  <  AE015451/1479089‑1478977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.