| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 1727853 = | 47 (1.180) | 7 (0.180) | 6/320 | NT | 16.0% | coding (311/2487 nt) | plsB | glycerol‑3‑phosphate acyltransferase |
| ? | AE015451 | 1727976 = | 29 (0.760) | coding (188/2487 nt) | plsB | glycerol‑3‑phosphate acyltransferase | |||||
CCGAGACCATCAACCAGTCTTCCATGACCCTCAACCTCGACCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTACCTGACCCCCGACCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1728093‑1727853‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccgccTTGGTGCACTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGAGGGCAACGCATAGAACACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGAAGACTGGTTGATGGTCTCGGAGCGCACCCACAGGTACAACAGGCGACGCAGGCCGCCGAATATCAGGCGGTGCAGGGGGGAACGGGTCATGGGGTGTGTGCCCTGGGTGTGATTTTCAGGTGAGTATTCTGCTAT > AE015451/1727976‑1728208 CCGAGACCATCAACCAGTCTTCCATGACCCTCAACCTCGACCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTACCTGACCCCCGACCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCC > 1:654825/1‑236 CGAGACCATCAACCAGTCTTCCATGACCCTCAACCTCGACCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTACCTGACCCCCGACCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCCC > 1:260881/1‑236 GACCCTCAACCTCGACCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTACCTGACCCCCGACCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCCCCGCCTTGGTGCACTCGTGGTC < 2:654824/233‑1 GCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTACCTGACCCCCGACCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCC > 2:303142/1‑169 CGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTACCTGACCCCCGACCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCCCCGCCTTGGTGCACTCGTGGTC < 1:506422/173‑1 TGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTACCTGACCCCCGACCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCCCCGCCTTGGTGCACTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGAGG < 1:717509/164‑1 GCAGGACCCCGCCGCGTTCTTCTACCTGCCCCCCGCCCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCCCCGCCTTGGTGCACTCGT < 1:79527/91‑1 gGGACCCCGCCGCGTTCTTCTACCTGACCCCCGCCCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCCCCGCCTTGGTGCACTCGTGGTCGAGCAC < 2:87087/98‑1 CCCCGACCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCCCCGCCTTGGTGCACTCGTGGTCGAGCACG < 2:20654/72‑1 CCAGGACAAAAGCGCCGCCCCGCCCTGGTGCACTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGAGGGCAACGCATAGAACACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGA < 1:473525/122‑1 CCCCGCCTTGGTGCACTCGTGGTCGAGCACGGCGAGGTCGGTGAGCGCGGGCGAGGGCAACGCATAGAACACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGAAGACTGGT < 2:556099/113‑1 gGCCTTGGTGCACTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGAGGGCAACGCATAGAACACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGAAGACTGGTTGATGGTCTCGGAGCGCACCCACAGGTACAACAGGCGACGCAGGCCGCCGAATATCAGGCGGTGCAGGGGGGAACGGGTCATGGGGTGTGTGCCCTGGGTGTGATTTTCAGGTGAGT < 1:651961/226‑1 CGCCTTGGTGGACTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGAGGGCAACGCATAGAACACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGAAGACTGGTTGATGGTCTCGGAGCGCAC < 2:246505/129‑1 CGCCTTGGTGCACTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGCAGGCAACGCc > 2:278492/1‑60 CGCCTTGGTGCACTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGAGGGCAACGCATAGAACACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGAAGACTGGT < 1:84556/110‑1 CGCCTTGGTGCACTCGTGGGCGAGCACGGCCAGGTCGGTGGGCGCGGGCGAGGGCAACGCATAGAACACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGAAGACTGGTTGATGGTCTCGGAGCGCA < 2:97103/128‑1 tgCTTGGTGCCCTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGAGGGCAACGCATAGACCACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGAAGACTGGTTGATGGTCTCGGAGCGCA < 2:696874/125‑1 GCCTTGGTGCACTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGAGGGCAACGCATAGAACACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGAAGACTGGTTGATGGTCTCGGAGCGCACCCACAGGTACAACAGGCGACGCAGGCCGCCGAATATCAGGCGGTGCAGGGGGGAACGGGTCATGGGGTGTGTGCCCTGGGTGTGATTTTCAGGTGAGTATTCTGCTAT > 1:746329/1‑236 CCGAGACCATCAACCAGTCTTCCATGACCCTCAACCTCGACCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTACCTGACCCCCGACCCGGACTGGCTCGGCCGCCAGGACAAAAGCGGCGCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1728093‑1727853‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccgccTTGGTGCACTCGTGGTCGAGCACGGCCAGGTCGGTGAGCGCGGGCGAGGGCAACGCATAGAACACCGGCCGGCTGCGGTCGAGGTTGAGGGTCATGGAAGACTGGTTGATGGTCTCGGAGCGCACCCACAGGTACAACAGGCGACGCAGGCCGCCGAATATCAGGCGGTGCAGGGGGGAACGGGTCATGGGGTGTGTGCCCTGGGTGTGATTTTCAGGTGAGTATTCTGCTAT > AE015451/1727976‑1728208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |