New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1777515 =	54 (1.350)	3 (0.080)	3/318	NT	5.6%	intergenic (+249/+43)	PP_5476/PP_1585	conserved protein of unknown function/putative Antidote protein
	?	AE015451	1777535 =	50 (1.320)					intergenic (+269/+23)	PP_5476/PP_1585	conserved protein of unknown function/putative Antidote protein

CAACGCCAACCGTCAACAACATCCTGCGCGAACGGGGCGGTGTTTCCGCCGACATGGCACTGCGCCTGTCCATCTGCCTGGACACCACCCCTGAGTTCTGGCTCAACCTGCAGACGGCCTTCGATCTGCGCACAGCCGAACAGCAACACGGCGATGAGATCATCGGGTCGGTCCAGCGTCTGGTCGCTTGAACACATCCTGATCAATAAACAGGGGCGCCACGGGCGTGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1777748‑1777515 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggcgccCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCCAGGCAGATGGACAGGCGCAGTGCCATGTCGGCGGAAACACCGCCCCGTTCGCGCAGGATGTTGTTGACGGT  >  AE015451/1777535‑1777740                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAACGCCAACCGTCAACAACATCCTGCGCGAACGGGGCGGTGTTTCCGCCGACATGGCACTGCGCCTGTCCATCTGCCTGGACACCACCCCTGAGTTCTGGCTCAACCTGCAGACGGCCTTCGATCTGCGCACAGCCGAACAGCAACACGGCGATGAGATCATCGGGTCGGTCCAGCGTCTGGTCGCTTGAACACATCCTGATCAATAAACAGGGGCGCCACGGGCGTGGCG                                                                                                                                                                                                                  >  2:634806/1‑232                                              CCGCCGACATGGCACTGCGCCTGTCCATCTGCCTGGACACCACCCCTGAGTTCTGGCTCAACCTGCAGACGGCCTTCGATCTGCGCACAGCCGAACAGCAACACGGCGATGAGATCATCGGGTCGGTCCAGCGTCTGGTCGCTTGAACACATCCTGATCAATAAACAGGGGCGCCACGGGCGTGGCGCCCCTGTTTATTGATC                                                                                                                                                                                                  <  2:98729/203‑1                                                                            GCCTGGACACCACCCCTGAGTTCTGGCTCAACCTGCAGACGGCCTTCGATCTGCGCACAGCCGAACAGCAACACGGCGATGAGATCATCGGGTCGGTCCAGCGTCTGGTCGCTTGCACACATCCTGATCAATAAACAGGGGCGCCACGGGCGTGG                                                                                                                                                                                                                    >  2:126055/1‑155                                                                             CCTGGACACCACCCCTGAGTTCTGGCTCAACCTGCAGACGGCCTTCGATCTGCGCACAGCCGAACAGCAACACGGCGATGAGATCATCGGGTCGGTCCAGCGTCTGGTCGCTTGAACACATCCTGATCAATAAACAGGGGCGCCACGGGCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCG                                                                                                                                              <  1:590724/224‑1                                                                             CCTGGACACCACCCCTGAGTTCTGGCTCAACCTGCAGACGGCCTTCGATCTGCGCACAGCCGAACAGCAACACGGCGATGAGATCATCGGGTCGGTCCAGCGTCTGGTCGCTTGAACACATCCTGATCAATAAACAGGGGCGCCACGGGCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCG                                                                                                                                              >  2:590723/1‑224                                                                                                                        TTCGATCTGCGCACAGCCGAACAGCAACACGGCGATGAGATCATCGGGTCGGTCCAGCGTCTGGTCGCTTGAACACATCCTGATCAATAAACAGGGGCGCCACGGGCGT                                                                                                                                                                                                                      >  1:52989/1‑109                                                                                                                                                                                                                                        ggCCCTGTTTATTGATCAGGAGGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCCAGGCAGATGGACAGGCGCAGTGCCATGTCGGCGGAAACACCGCCCCGTTCGCGCAGGATGTTGTTGACGGT  <  1:80594/207‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAACGCCAACCGTCAACAACATCCTGCGCGAACGGGGCGGTGTTTCCGCCGACATGGCACTGCGCCTGTCCATCTGCCTGGACACCACCCCTGAGTTCTGGCTCAACCTGCAGACGGCCTTCGATCTGCGCACAGCCGAACAGCAACACGGCGATGAGATCATCGGGTCGGTCCAGCGTCTGGTCGCTTGAACACATCCTGATCAATAAACAGGGGCGCCACGGGCGTGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1777748‑1777515 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggcgccCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCCAGGCAGATGGACAGGCGCAGTGCCATGTCGGCGGAAACACCGCCCCGTTCGCGCAGGATGTTGTTGACGGT  >  AE015451/1777535‑1777740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.