New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 2086080 | NA (NA) | 6 (0.160) | 6/322 | NT | NA | coding (195/1302 nt) | PP_1865 | transposase |
? | AE015451 | = 2086138 | NA (NA) | coding (253/1302 nt) | PP_1865 | transposase |
GGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2085839‑2086080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcctgTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCT < AE015451/2086138‑2085935 GGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTC > 1:206667/1‑236 ACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGTCAAGACCACTGGACGACCTTCCCTTCAGCCTG > 1:99937/1‑232 TTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGC > 2:329328/1‑219 ccCCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 1:91541/205‑1 CCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 1:198853/204‑1 CTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTG < 2:400856/219‑1 GCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 2:361377/163‑1 GCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGA < 2:168496/171‑1 AGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 2:239181/144‑1 AGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC > 1:239181/1‑144 TTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATC < 1:282041/184‑1 ACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATGGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGAGGACCTTCCCGTCAG > 1:146336/1‑127 GTTCTCGACCATTCTCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCC < 1:554688/192‑1 GGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGG > 2:534509/1‑143 AAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGGCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGGCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCG > 1:73350/1‑218 GCCTGTCACCAGAGCACGCAACAGGGC < 2:186027/27‑1 CTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCT < 2:515094/207‑1 CTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGG > 2:737365/1‑188 CTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGCCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTCGTCTTGCCGCCGCATGCAGCGATCGCTTCAAGCCCAATGAAACAAG > 2:317391/1‑133 GGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2085839‑2086080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcctgTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCT < AE015451/2086138‑2085935 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |