New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2101747 =	47 (1.180)	3 (0.080)	3/300	NT	6.8%	coding (561/768 nt)	PP_1878	conserved protein of unknown function
	?	AE015451	2101765 =	40 (1.120)					coding (543/768 nt)	PP_1878	conserved protein of unknown function

ACAATCAGGTGACCCGCGCTGCCCATGAGGGCTTCTTGCCCGCTGTCGAGGCCAAGCATTGGGTCAAGGAAATCCGCCATATCCTGGTGCTGCTGCATATAGAGTTCTTCAACAACCTCGGCCAACAGGCCCTGCAAAAAGGCCAGCCCGGCCAGGCGCGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2101913‑2101747 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggcgcgcctggccGGGCTGGCCTTTTTGCAGGGCCTGTTGGCCGAGGTTGTTGAAGAACTCTATATGCAGCAGCACCAGGATATGGCGGATTTCCTTGACCCAATGCTTGGCCTCGACAGCGGGCAAGAAGCCCTCATGGGCAGCGCGGGTCACCTGATTGTGCAGCGCCTCC  >  AE015451/2101765‑2101924                                                                                                                                                                                                                                                                                                                                         ACAATCAGGTGACCCGCGCTGCCCATGAGGGCTTCTTGCCCGCTGTCGAGGCCAAGCATTGGGTCAAGGAAATCCGCCATATCCTGGTGCTGCTGCATATAGAGTTCTTCAACAACCTCGGCCAACAGGCCCTGCAAAAAGGCCAGCCCGGCCAGGCGCGC                                                                                                                                                                        >  2:614517/1‑161                                               CGAGGCCAAGCATTGGGTCAAGGAAACCCGCCATATCCTGGTGCTGCTGCATATAGAGTTCTTCAACAACCTCGGCCAACAGGCCCTGCAAAAAGGCCAGCCCGGCCAGGCGCGCCTGGCCGGGCTGGCCTTTTTGCAGGGCCTGTTGGCCGAGGTTGTTGAAGAACTCTATATGCAG                                                                                                         <  1:202758/178‑1                                                                                                CATATAGAGTTCTTCAACAACCTCGGCCAACAGGCCCTGCAAAAAGGCCAGCCCGGCCAGGCGCGCCTGGCCGGGCTGGCCTTTTTGCAGGGCCTGTT                                                                                                                                        <  1:503283/98‑1                                                                                                CATATAGAGTTCTTCAACAACCTCGGCCAACAGGCCCTGCAAAAAGGCCAGCCCGGCCAGGCGCGCCTGGCCGGGCTGGCCTTTTTGCAGGGCCTGTT                                                                                                                                        >  2:503282/1‑98                                                                                                                                                    CCGGCCAGGCGCGCCTGGCCGGGCTGGCCTTTTTGCAGGGCCTGTTGGCCGAGGTTGTTGAAGAACTCTATATGCAGCAGCACCAGGATATGGCGGATTTCCTTGACCCAATGCTTGGCCTCGACAGCGGGCAAG                                               <  1:130235/135‑1                                                                                                                                                    CCGGCCAGGCGCGCCTGGCCGGGCTGGCCTTTTTGCAGGGCCTGTTGGCCGAGGTTGTTGAAGAACTCTATATGCAGCAGCACCAGGATATGGCGGATTTCCTTGACCCAATGCTTGGCCTCGACAGCGGGCAAG                                               >  2:130235/1‑135                                                                                                                                                            GCGCGCCTGGCCGGGCTGGCCTTTTTGCAGGGCCTGTTGGCCGAGGTTGTTGAAGAACTCTATATGCAGCAGCACCAGGATATGGCGGATTTCCTTGACCCAATGCTTGGCCTCGACAGCGGGCAAGAAGCCCTCATGGGCAGCGCGGGTCACCTGATTGT             >  1:614518/1‑161                                                                                                                                                            GCGCGCCTGGCCGGGCTGGCCTTTTTGCAGGGCCTGCTGGCCGAGGTTGTTGAAGAACTCTATATGCAGCAGCACCAGGATATGGCGGATTTCCTTGACCCAATGCTTGGCCTCGACAGCGGGCAAGAAGCCCTCATGGGCAGCGCGGGTCACCTGATTGTGCAGCGCCTCC  <  2:463224/172‑1                                                                                                                                                                                                                                                                                                                                         ACAATCAGGTGACCCGCGCTGCCCATGAGGGCTTCTTGCCCGCTGTCGAGGCCAAGCATTGGGTCAAGGAAATCCGCCATATCCTGGTGCTGCTGCATATAGAGTTCTTCAACAACCTCGGCCAACAGGCCCTGCAAAAAGGCCAGCCCGGCCAGGCGCGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2101913‑2101747 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggcgcgcctggccGGGCTGGCCTTTTTGCAGGGCCTGTTGGCCGAGGTTGTTGAAGAACTCTATATGCAGCAGCACCAGGATATGGCGGATTTCCTTGACCCAATGCTTGGCCTCGACAGCGGGCAAGAAGCCCTCATGGGCAGCGCGGGTCACCTGATTGTGCAGCGCCTCC  >  AE015451/2101765‑2101924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.