| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 4681791 | 51 (1.280) | 5 (0.130) | 5/318 | NT | 9.2% | coding (81/1431 nt) | mltD | Membrane‑bound lytic murein transglycosylase D |
| ? | AE015451 | = 4681800 | 50 (1.320) | coding (90/1431 nt) | mltD | Membrane‑bound lytic murein transglycosylase D | |||||
CAAACAACTCGCATGTCGCTGTTTTTGCTGCCTTGAGGTCTTGGAAGGACACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4681552‑4681791‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcagccCACCAAGGTGGCTGCCAGGGCCAGCGCACTGATTTGGGCCAGGCGCGTCAGGGCGACGGAATGAGAGGTTCTGCGGCTACGGGAAGACATCGGCTGATACAGGTATCCGGGCGAAAAAGTTCGGCGATTCTAGAAACCGCTCCGGGCCTGGTCAACCTTTGACCATCACTTGCGATATATCTTGCGGT < AE015451/4681800‑4681613 CAAACAACTCGCATGTCGCTGTTTTTGCTGCCTTGAGGTCTTGGAAGGACACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGC < 1:517419/236‑1CAAACAACTCGCATGTCGCTGTTTTTGCTGCCTTGAGGTCTTGGAAGGACACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGC > 1:630026/1‑236 CACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGC < 2:664979/187‑1 ATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGC > 1:318596/1‑167 TCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCCACCAAGGTGGCTGCCAGGGCCAGCGCACTGATTTGGGCCAGGCGCGTCAGGGCGACGGCAT > 2:540974/1‑150 ATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCCACCAAGGTGGCTGCCAGGGCCAGCGCACTGATTTGGGCCAGGCGCGTCAGGGCGACGGAATGAGAGGTTCTGCGGCTACGGGAAG > 2:386346/1‑167 GCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCCACCAAGGTGGCTGCCAGGGCCAGCGCACTGATTTGGGCCAGGCGCGTCAGGGCGACGGAATGAGAGGTTCTGCGGCTACGGGAAGACATCGGCTGATACAGGTATCCGGGCGAAAAAGTTCGGCGATTCTAGAAACCGCTCCGGGCCTGGTCAACCTTTGACCATCACTTGC < 1:386347/210‑1 GCTGGCCCTGGCAGCCCACCAAGGTGGCTGCCAGGGCCAGCGCACTGATTTGGGCCAGGCGCGTCAGGGCGACGGAATGAGAGGTTCTGCGGCTACGGGAAGACATCGGCTGATACAGGTATCCGGGCGAAAAAGTTCGGCGATTCTAGAAACCGCTCCGGGCCTGGTCAACCTTTGACCAT > 1:720464/1‑182 GCTGGCCCTGGCAGCCCACCAAGGTGGCTGCCAGGGCCAGCGCACTGATTTGGGCCAGGCGCGTCAGGGCGACGGAATGAGAGGTTCTGCGGCTACGGGAAGACATCGGCTGATACAGGTATCCGGGCGAAAAAGTTCGGCGATTCTAGAAACCGCTCCGGGCCTGGTCAACCTTTGACCAT < 2:720463/182‑1 TGGCAGCCCACCAAGGTGGCTGCCAGGGCCAGCGCACTGATTTGGGCCAGGCGCGTCAGGGCGACGGAATGAGAGGTTCTGCGGCTACGGGAAGACATCGGCTGATACAGGTATCCGGGCGAAAAAGTTCGGCGATTCTAGAAACCGCTCCGGGCCTGGTCAACCTTTGACCATCACTTGCGATATATCTTGCGGT > 2:45013/1‑196 GCCCACCAAGGTGGCTGCCAGGGCCAGCGCACTGATTTGGGCCAGGCGCGTCAGGGCGACGGAATGAGAGGTTCTGCGGCTACGGGAAGACATCGGCTGATACAGGTATCCGGGCGAAAAAGTTCGGCGATTCTAGAAACCGCTCCGGGCCTGGTCAACCTTTGACCATCACTTGCGATATATCTTGC > 2:49983/1‑188 CAAACAACTCGCATGTCGCTGTTTTTGCTGCCTTGAGGTCTTGGAAGGACACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4681552‑4681791‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcagccCACCAAGGTGGCTGCCAGGGCCAGCGCACTGATTTGGGCCAGGCGCGTCAGGGCGACGGAATGAGAGGTTCTGCGGCTACGGGAAGACATCGGCTGATACAGGTATCCGGGCGAAAAAGTTCGGCGATTCTAGAAACCGCTCCGGGCCTGGTCAACCTTTGACCATCACTTGCGATATATCTTGCGGT < AE015451/4681800‑4681613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |