New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5053079	44 (1.100)	3 (0.080)	3/316	NT	6.6%	coding (1372/1833 nt)	gsiA	glutathione ABC transporter ATP‑binding subunit
	?	AE015451	= 5053112	44 (1.170)					coding (1339/1833 nt)	gsiA	glutathione ABC transporter ATP‑binding subunit

CGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5052999‑5053079 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcccgccGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCATCGCTCGGGCTCTGGCGTTGAGACCAGGCACGATTGTCGCTGACGAGGCGGTTTCGGCCTTGGATGTATCGGTAAAAGTCCAAATTGTGAATCTGTTGCTCGAGTTGCAACAAG  <  AE015451/5053112‑5052941                                                                                                                                                                                                                                                               CGAAACCGCCTCGACAGCGACAATCCTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCCGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCATCGCTCGGGCTCTGGCGTTGAGACCAGG                                                                                        >  1:399131/1‑167                                                 CCGAGCGATGCACACACGTTGACGCTGCCCGCCGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCAGCGCTCGGGCTCTGG                                                                                                     >  2:91754/1‑106                                                            ACACACGTTGACGCTGCCCGCCGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCATCGCTCGGGCTCTGGCGTTGAGACCAGGCACGATTGTCGCTGACGAGGCGGTTTCGGCCT                                                        >  1:237772/1‑140                                                                            CCCGCCGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCATCGCTCGGGCTCTGGCGTTGAGACCAGGCACGATTGTCGCTGACGAGGCGGTTTCGGCCTTGGATGTATCGGTAAAAGTCCAAATTGTGAAT                        <  1:115044/156‑1                                                                             CCGCCGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCATCGCTCGGGCTCTGGCGTTGAGACCAGGCACGATTGTCGCTGACGAGGCGGTTTCGGCCTTGGATGTATCGGTAAAAGTCCAAATTGTGAATCTGTTGCTCGAGTTGCAACAAG  <  2:214837/177‑1                                                                             CCGCCGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCATCGCTCGGGCTCTGGCGTTGAGACCAGGCACGATTGTCGCTGACGAGGCGGTTTCGGCCTTGGATGTATCGGTAAAAGTCCAAATTGTGAATCTGTTGCTCGAGTTGCAA      >  1:14863/1‑173                                                                               GCCGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCATCGCTCGGGCTCTGGCGTTGAGACCAGGCACGATTGTCGCTGACGAGGCGGTTTCG                                                            >  1:180742/1‑117                                                                               GCCGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCATCGCTCGGGCTCTGGCGTTGAGACCAGGCACGATTGTCGCTGACGAGGCGGTTTCG                                                            >  1:237997/1‑117                                                                                                                                                                                                                                                               CGAAACCGCCTCGTCAGCGACAATCGTGCCTGGTCTCAACGCCAGAGCCCGAGCGATGCACACACGTTGACGCTGCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5052999‑5053079 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcccgccGATGCTGCTTGGCGCTTGCCGCACGAGTTCTCTGGCGGGCAGCGTCAACGTGTGTGCATCGCTCGGGCTCTGGCGTTGAGACCAGGCACGATTGTCGCTGACGAGGCGGTTTCGGCCTTGGATGTATCGGTAAAAGTCCAAATTGTGAATCTGTTGCTCGAGTTGCAACAAG  <  AE015451/5053112‑5052941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.