New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 5182665 | 54 (1.350) | 3 (0.080) | 3/316 | NT | 5.7% | coding (155/381 nt) | PP_4562 | conserved protein of unknown function |
? | AE015451 | = 5182799 | 49 (1.300) | coding (289/381 nt) | PP_4562 | conserved protein of unknown function |
GCACTGGCACCGCAAGTCACAAACCTTGCTCCGCCCCGTGCCACCCCTCACAATGCAGGCCTTCATAGCGTCAACGCGCAGGAACCTGCATGAAACTCGACAAACCCGCCGCCATCGCCCGGCGCAACGAAGCACTGGCCCGGCCGGTGCTGACCAGCAGCAACACCCTGTTCGCCATCCTGGACAACAAACGCAACCTGTGGTGGTTCGAAGTGCCGGTGGCACTGCTGGGCAAGGGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5182422‑5182665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggccaggcTGATGGTGGAGCGGCGCTTGCCAGGCTTGCGCACTTCCATTTGCTCAAGGTGAGCCTTGAGGAAATTGGTGGGCACCTTCAGGTGCTGCAGCTCATCGCTTTCCGGCGTGTGCAGCAGCAGGTTGACCCAGTCGGCCTGGCCCTTGCCCAGCAGTGCCACCGGCACTTCGAACCACCA < AE015451/5182799‑5182622 GCACTGGCACCGCAAGTCACAAACCTTGCTCCGCCCCGTGCCACCCCTCACAATGCAGGCCTTCATAGCGTCAACGCGCAGGAACCTGCATGAAACTCGACAAACCCGCCGCCATCGCCCGGCGCAACGAAGCACTGGCCCGGCCGGTGCTGACCAGCAGCAACACCCTGTTCGCCATCCTGGACAACAAACGCAACCTGTGGTGGTTCGAAGTGCCGGTGGCACTGCTGGGCAAG < 1:735078/236‑1 CTCACAATGCAGGCCTTCATAGCGTCAACGCGCAGGAACCTGCATGAAACTCGACAAACCCGCCGCCATCGCCCGGCGCAACGAAGCACTGGCCCGGCCGGTGCTGACCAGCAGCAACACCCTGTTCGCCATCCTGGACAACAAACGCAACCTGTGGTGGTTCGAAGTGCCGGTGGCACTGCTGGGCAAGGGCCAGGCTGATGGTGGAGCGGCGCTTGCCAGGCTTGCGCACTTC > 1:679503/1‑235 ACAATGCAGGCCTTCATAGCGTCAACGCGCAGGAACCTGCATGAAACTCGACAAACCCGCCGCCATCGCCCGGCGCAACGAAGCACTGGCCCGGCCGGTGCTGACCAGCAGCAACACCCTGTTCGCCATCCTGGACAACAAACGCAACCTGTGGTGGTTCGAAGTGCCGGTGGCACTGCTGGGCAAGG > 2:573457/1‑188 CAACGCGCAGGAACCTACATGAAACTCGACAAACCCGCCGCCATCGCCCGGCGCAACGAAGCACTGGCCCGGCCGGTGCTGACCAGCAGCAACACCCTGTTCGCCATCCTGGACAACAAACGCAACCTGTGGTGGTTCGAAGTGCCGGTGGCACTGCTGGGCAAGGGCCA > 2:318429/1‑170 ACGCGCAGGAACCTGCATGAAACTCGACAAACCCGCCGCCATCGCCCGGCGCAACGAAGCACTGGCCCGGCCGGTGCTGACCAGCAGCAACACCCTGTTCGCCATCCTGGACAACAAACGCAACCTGTGGTGGTTCGAAGTGCCGGTGGCACTGCTGGGCAAGGGCC < 1:445523/167‑1 CCATCGCCCGGCGCAACGAAGCACTGGCCCGGCCGGTGCTGACCAGCAGCAACACCCTGTTCGCCATCCTGGACAACAAACGCAACCTGTGGTGGTTCGAAGTGCCGGTGGCACTGCTGGGCAAGGGCCAGGCTGATGGTGGAGCGGCGCTTGCCAGGCTTGCGCACTTCCATTTGCTCAAGGTGAGCCTTGAGGAAATTGGTG < 2:679502/204‑1 ACAACAAACGCAACCTGTGGTGGTTCGAAGTGCCGGTGGCACTGCTGGGCAAGGGCCAGGCTGATGGTGGAGCGGCGCTTGCCAGGCTTGCGCACTTCCATTTGCTCAAGGTGAGCCTTGAGGAAATTGGTGGGCACCTTCAGGTGCTGCAGCTCATCGCTTT > 1:493922/1‑163 CAGGCTGATGGTGGAGCGGCGCTTGCCAGGCTTGCGCACTTCCATTTGCTCAAGGTGAGCCTTGAGGAAATTGGTGGGCACCTTCAGGTGCTGCAGCTCATCGCTTTCCGGCGTGTGCAGCAGCAGGTTGACCCAGTCGGCCTGGCCCTTGCCCAGCAGTGCCACCGGCACTTCGAACCACCA > 1:602394/1‑183 GCACTGGCACCGCAAGTCACAAACCTTGCTCCGCCCCGTGCCACCCCTCACAATGCAGGCCTTCATAGCGTCAACGCGCAGGAACCTGCATGAAACTCGACAAACCCGCCGCCATCGCCCGGCGCAACGAAGCACTGGCCCGGCCGGTGCTGACCAGCAGCAACACCCTGTTCGCCATCCTGGACAACAAACGCAACCTGTGGTGGTTCGAAGTGCCGGTGGCACTGCTGGGCAAGGGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5182422‑5182665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggccaggcTGATGGTGGAGCGGCGCTTGCCAGGCTTGCGCACTTCCATTTGCTCAAGGTGAGCCTTGAGGAAATTGGTGGGCACCTTCAGGTGCTGCAGCTCATCGCTTTCCGGCGTGTGCAGCAGCAGGTTGACCCAGTCGGCCTGGCCCTTGCCCAGCAGTGCCACCGGCACTTCGAACCACCA < AE015451/5182799‑5182622 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |