| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 5554410 | 61 (1.530) | 7 (0.190) | 7/314 | NT | 10.8% | coding (486/546 nt) | PP_4886 | conserved protein of unknown function |
| ? | AE015451 | = 5554486 | 59 (1.580) | coding (410/546 nt) | PP_4886 | conserved protein of unknown function | |||||
GCTTGGGTCACCCACAATTATCAGCTCGCCAGGGAATACAACAGTGTTGACGACATGCGCATTCAGCACATCAAACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCATGCGGATTAATGAAGCTGCGCGCCTCGGACATGGTAGTACCTCACGCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGCCAGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5554173‑5554410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgctgGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGGCAACGTCACGGGCGGATGGGACCGCATCAACAACAAGAAGTATGCGTGAGGTACTACCATGTCCGAGGCGCGCAGCTTCATTAATCCGCATGCGCAGTCGTATGAGTCGCTGAAGG < AE015451/5554486‑5554283 GCTTGGGTCACCCACAATTATCAGCTCGCCAGGGAATACAACAGTGTTGACGACATGCGCATTCAGCACATCAAACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCATGCGGATTAATGAAGCTGCGCGCCTCGGACATGGTAGTACCTCACGCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGCCAGCG > 1:401274/1‑235GCTTGGGTCACCCACAATTATCAGCTCGCCAGGGAATACAACAGTGTTGACGACATGCGCATTCAGCACATCAAACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCATGCGGATTAATGAAGCTGCGCGCCTCGGACATGGTAGTACCTCACGCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGCC > 2:436500/1‑231 CCAGGGAATACAACAGTGTTGACGACATGCGCATTCAGCACATCAAACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCATGCGGATTAATGAAGCTGCGCGCCTCGGACATTGTAGTACCTCACGCATACTTCTTGTTGTTGGTGCGTTCCCATCTGCCCGGTACGTTGCCG > 1:159361/1‑201 TGACGACATGCGCATTCAGCACATCAAACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCATGCGGATTAATGAAGCTGCGCGCCTCGGACATGGTAGTACCTCACGCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGCCAG > 1:17568/1‑186 CGCATTCAGCACATCAAACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCGTGCGGATTAATGAAGCTGCGCGCCTCGGACATGGTAGTACCTCACGCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCC > 2:582172/1‑171 AAACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCATGCGGATTAATGAAGCTGCGCGCCTCGGACATGGTAGTACCTCACGCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTCCCGC > 2:144275/1‑158 AACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCATGCGGATTAATGAAGCTGCGCGCCTCGGACATGGTAGTACCTCACGCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATC < 2:715867/206‑1 AACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCATGCGGATTAATGAAGCTGCGCGCCTCGGACATGGTAGTACCTCACGCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATC > 1:715868/1‑206 GCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGCCAATCTAAACGCGGCAGAAACGCCTCGACGGCAGCGATGGCGGCAACGTCACG > 1:226364/1‑155 ATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGGCAGCGCTGGGGTGTCAGTGCAATGCGTGCAGGTGAACTACGGGCG > 2:460929/1‑92 CTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAAC > 2:56219/1‑115 CCATCCGCCCGTGACGTTGCCGCCAGCGC > 2:300171/1‑29 GCCCGTGACGTTGCCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGGCAACGTCACGGGCGGATGGGACCGCATCAACAACAAGAAGTATGCGTGAGGTACTACCATGTCCGAGGCGCGCAGCTTCATTAATCCGCATGCGCAGTCGTATGAGTCGCT > 1:480058/1‑224 GTGACGTTGCCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGGCAACGTCACGGGCGGATGGGACCGCATCAACAACAAGAAGTATGCGTGAGGTACTACCATGTCCGAGG > 2:682316/1‑177 CCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCACGACAATCAACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGGCAACGTCACGGGCGGATGGGACCGCATCAACAACAAGAAGTATGCGTGAGGTACTACCATGTCCGAGGCGCGCAGCTTCATTAATCCGCATG < 1:56219/192‑1 CGCCAGCGCTGGGGTGCCAGGGGAGGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGGCAACGTCACGGGCGGATGGGACCGCATCAACAACAAGAAGTATGCGTGAGGTACTACCATGTCCGAGGCGCGCAGCTTCATTAATCCGCA < 2:185923/189‑1 CCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGGCAACGTCACGGGCGGATGGGACCGCATCAACAACAAGAAGTATGCGTGAGGTACTACCATGTCCGAGGCGCGCAGCTTCATTAATC < 2:445444/183‑1 CAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGGCAACGTCACGGGCGGATGGGACCGCATCAACAACAAGAAGTATGCGTGAGGTACTACCATGTCCGAGGCGCGCAGCTTCATTAATCCGCATGCGCAGTCGTATGAGTCGCTGAAGG < 2:366991/212‑1 CAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGGCAACGTCACGGGCGGATGGGACCGCATCAACAACAAGAAGTATGCGTGAGGTACTACCATGTCCGAGGCGCGCAGCTTCATTAATCCGCATGCGCAGTCGTATGAGTCGCTGAAGG > 1:366992/1‑212 GCTTGGGTCACCCACAATTATCAGCTCGCCAGGGAATACAACAGTGTTGACGACATGCGCATTCAGCACATCAAACTTGGCCCGCTGATTCGCGTTCATGGGCGTATCGGCCTTCAGCGACTCATACGACTGCGCATGCGGATTAATGAAGCTGCGCGCCTCGGACATGGTAGTACCTCACGCATACTTCTTGTTGTTGATGCGGTCCCATCCGCCCGTGACGTTGCCGCCAGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5554173‑5554410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgctgGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGGCAACGTCACGGGCGGATGGGACCGCATCAACAACAAGAAGTATGCGTGAGGTACTACCATGTCCGAGGCGCGCAGCTTCATTAATCCGCATGCGCAGTCGTATGAGTCGCTGAAGG < AE015451/5554486‑5554283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |