| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 5837228 | 51 (1.280) | 3 (0.080) | 3/326 | NT | 5.5% | coding (29/1371 nt) | PP_5116 | conserved protein of unknown function |
| ? | AE015451 | = 5837254 | 53 (1.370) | coding (55/1371 nt) | PP_5116 | conserved protein of unknown function | |||||
TTCACGTTCACGCACCACAAGGAAAGCGCTCATGACTGACTCAACGACCCTGCAACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5837169‑5837228‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccCGCCGTAGAGGTTGTTGGCTCCGGCAGGCTGTTGCAGGGTCGTTGAGTCAGTCATGAGCGCTTTCCTTGTGGTGCGTGAACGTGAAGGCTGCACGGGAATGGGTGAGGAATTCATAGGCAGCCAGGCCTACCTGCTCGGCTGTCACGGTCTCGATGGCCTGTTGTTCTTCCTCGAGCGAAATAACCGGCAAGCCACAGG < AE015451/5837254‑5837056 TTCACGTTCACGCACCACAAGGAAAGCGCTCATGACTGACTCAACGACCCTGCAACAGCCCGCCGTAGAGGTTGTTGGCTCCGGCAGGCTGTTGCAGGGTCGTTGAGTCAGTCATGAGCGCTTTCCTTGTGGTGCGTGAACGTGAAGGCTGCACGGGAATGGGTGAGGAAT > 2:492150/1‑171 AAGGAAAGCGCTCATGACTGACTCAACGACCCTGCAACAGCCCGCCGTAGAGGTTGTTGGCTCCGGCAGGCTGTTGCAGGGTCGTTGAGTCAGTCATGAGCGCTTTCCTTGTGGTGCGTGAACGTGAAGGCTGCACGGGAATGGGT < 1:12912/146‑1 AAGGAAAGCGCTCATGACTGACTCAACGACCCTGCAACAGCCCGCCGTAGAGGTTGTTGGCTCCGGCAGGCTGTTGCAGGGTCGTTGAGTCAGTCATGAGCGCTTTCCTTGTGGTGCGTGAACGTGAAGGCTGCACGGGAATGGGT > 2:12912/1‑146 CAGCCCGCCGTAGAGGTTGTTGGCTCCGGCAGGCTGTTGCAGGGTCGTTGAGTCAGTCATGAGCGCTTTCCTTGTGGTGCGTGAACGTGAAGGCTGCACGGGAATGGGTGAGGAATTCATAGGCAGCCAGGCCTACCTGCTCGGCTGTCACGGTCTCGATGGCCTGTTGTTCTTCCTCGAGCGA > 1:457110/1‑184 CAGCCCGCCGTAGAGGTTGTTGGCTCCGGCAGGCTGTTGCAGGGTCGTTGAGTCAGTCATGAGCGCTTTCCTTGTGGTGCGTGAACGTGAAGGCTGCACGGGAATGGGTGAGGAATTCATAGGCAGCCAGGCCTACCTGCTCGGCTGTCACGGTCTCGATGGCCTGTTGTTCTTCCTCAAGCGAAATAACCGGCA < 1:140871/195‑1 CCGCCGTAGAGGTTGTTGGCTCCGGCAGGCTGTTGCAGGGTCGTTGAGTCAGTCATGAGCGCTTTCCTTGTGGTGCGTGAACGTGAAGGCTGCACGGGAATGGGTGAGGAATTCATAGGCAGCCAGGCCTACCTGCTCGGCTGTCACGGTCTCGATGGCCTGTTGTTCTTCCTCGAGCGAAATAACCGGCAAGCCACAGG > 2:64752/1‑200 TTCACGTTCACGCACCACAAGGAAAGCGCTCATGACTGACTCAACGACCCTGCAACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5837169‑5837228‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccCGCCGTAGAGGTTGTTGGCTCCGGCAGGCTGTTGCAGGGTCGTTGAGTCAGTCATGAGCGCTTTCCTTGTGGTGCGTGAACGTGAAGGCTGCACGGGAATGGGTGAGGAATTCATAGGCAGCCAGGCCTACCTGCTCGGCTGTCACGGTCTCGATGGCCTGTTGTTCTTCCTCGAGCGAAATAACCGGCAAGCCACAGG < AE015451/5837254‑5837056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |