New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4562960 =	46 (1.150)	3 (0.080)	3/322	NT	6.4%	coding (901/2316 nt)	vgrG‑III	type 6 secretion system protein
	?	AE015451	4563127 =	44 (1.150)					coding (734/2316 nt)	vgrG‑III	type 6 secretion system protein

ACGCATCGTTCACGTAGCGGGTGCCTTGTTCAGCGCCAGCCGCTTCTTCCTGCAGGCTGGTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCCGCGCAGTACGTACCTGCTCGCAATAGCGCAAGCGCCGCAGGCATGCGCGGGCCTGGTCGC  >  AE015451/4562756‑4563193                                                                                                                                                                                                             |                                                                                                                                                                                                                                          aCGCATCGTTCACGTAGCGGGTGCCTTGTTCAGCGCCAGCCGCTTCTTCCTGCAGGCTGGTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGgcgc                                                                                                                                                                                                                                          <  1:671942/206‑1 (MQ=255)  cGCATCGTTCACGTAGCGGGTGCCTTGTTCAGCGCCAGCCGCTTCTTCCTGCAGGCTGGTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCt                                                                                                                                                                                                           >  1:487810/1‑236 (MQ=255)                      tGCCTTGTTCAGCGCCAGCCGCTTCTTCCTGCAGGCTGGTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGGGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCgtgg                                                                                                                                                                                                                         >  2:242034/1‑201 (MQ=255)                                cgcgcCAGCCGCTTCTTCCTGCAGGCTGGTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCg                                                                                                                                                                                                  <  2:714457/214‑1 (MQ=255)                                     cAGCCGCTTCTTCCTGCAGGCTGGTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAg                                                                                                                                                                                                                    <  2:476289/192‑1 (MQ=255)                                     cAGCCGCTTCTTCCTGCAGGCTGGTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTa                                                                                                                                                                         >  1:303259/1‑235 (MQ=255)                                              aatcCTGCAGGCTGGTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAgcgc                                                                                                                                                               <  2:628148/234‑1 (MQ=255)                                                           ggTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCCCCGc                                                                                                                                                                                                 >  2:164946/1‑189 (MQ=255)                                                                              tGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCAt                                                                                                                                                                                               >  1:426642/1‑172 (MQ=255)                                                                              tGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACt                                                                                                                               >  1:159696/1‑236 (MQ=255)                                                                                 cacaGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTg                                                                                                                                           >  2:608994/1‑221 (MQ=255)                                                                                 cacaGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTg                                                                                                                                           <  1:608995/221‑1 (MQ=255)                                                                                         gATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGcc                                                                                                                     >  2:454145/1‑235 (MQ=255)                                                                                              cgcgCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGc                                                                                                                                   >  2:693625/1‑216 (MQ=255)                                                                                               gcgcCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCgt                                                                                                                                                                                                                           <  2:377147/127‑1 (MQ=255)                                                                                               gcgcCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACg                                                                                                                                    <  2:693807/214‑1 (MQ=255)                                                                                                       gAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCg                                                                                                                                         <  1:538727/201‑1 (MQ=255)                                                                                                             tGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACAGCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGt                                                                                                                                                   <  1:97047/185‑1 (MQ=255)                                                                                                                  tCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCtt                                                                                                                   >  2:134549/1‑212 (MQ=255)                                                                                                                      cccGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCa                                                                                                                                                                     <  2:335208/158‑1 (MQ=255)                                                                                                                        cgcgGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGaa                                                                                     >  1:751576/1‑236 (MQ=255)                                                                                                                               ggCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGGGAAGGGCtt                                                                                                                                                                                                          >  2:121812/1‑112 (MQ=255)                                                                                                                                 ccGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAAt                                                                                                                                                                       >  2:608613/1‑145 (MQ=255)                                                                                                                                 ccGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTg                                                                                                                                           <  2:598122/173‑1 (MQ=255)                                                                                                                                   gacgaGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGCCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGCAGCGCCCCGGGTAATCAAAGCGCACGTa                                                                                                                                                          >  2:161270/1‑156 (MQ=255)                                                                                                                                      gaGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCg                                                                                                                                         <  1:299596/170‑1 (MQ=255)                                                                                                                                          gcgaccaggcccgcgcatgcctgcggcgcttgcgctattgcgagcaggtacgtactgcgcggcaagtGCAGCGCCGTCAGCCGTGTTTCAGTGAAg                                                                                                                                                                                                               <  1:601690‑M1/29‑1 (MQ=255)                                                                                                                                          gcgaccaggcccgcgcatgcctgcggcgcttgcgctattgcgagcaggtacgtactgcgcggcaagtGCAGCGCCGTCAGCCGTGTTTCAGTGAAg                                                                                                                                                                                                               >  2:601689‑M1/68‑96 (MQ=255)                                                                                                                                          gTGAAGCTCAGGCCTGTCGGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCAc                                                                   <  1:201781/236‑1 (MQ=255)                                                                                                                                            gAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACt                                                                  >  1:144895/1‑235 (MQ=255)                                                                                                                                                cTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGcc                                                              <  1:134549/235‑1 (MQ=255)                                                                                                                                                cTCAGGCCTGTCGGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGcc                                                              <  1:670082/235‑1 (MQ=255)                                                                                                                                                  cAGGCCTGTCTGCAGGCGCCCATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCtt                                                                                                                   <  2:159696/180‑1 (MQ=255)                                                                                                                                                     gCCTGTCTGCAGGCGCACCTCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGc                                                                                                                      <  2:112721/174‑1 (MQ=255)                                                                                                                                                     gCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTGCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGc                                                                                                                      <  1:71254/174‑1 (MQ=255)                                                                                                                                                          tCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGt                                                                             <  2:751575/210‑1 (MQ=255)                                                                                                                                                          atgcctgcggcgcttgcgctattgcgagcaggtacgtactgcgcggcaagtGCAGCGCCGTCCGCCGTGTTTCAGGGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTctggggc                                                                                                                     <  1:478707‑M1/119‑3 (MQ=255)                                                                                                                                                             gCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACg                                                                                                                                    <  1:43567/152‑1 (MQ=255)                                                                                                                                                             gCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACg                                                                                                                                    >  2:43567/1‑152 (MQ=255)                                                                                                                                                             gCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACCGGTCTGGGCCTTGTGCTCCTGCCGGTCGGCCgggct                                                                                           >  2:251435/1‑191 (MQ=255)                                                                                                                                                              cAGGCGCCCATCGTCGCCTTGCACTTCAGCCAGGCATGCGTCGTGGCCCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACg                                                                                                                                    <  2:561242/151‑1 (MQ=255)                                                                                                                                                                  cgcACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCgg                                                                                              >  2:188578/1‑185 (MQ=255)                                                                                                                                                                       aTCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTcg                                                                           >  1:445525/1‑199 (MQ=255)                                                                                                                                                                       aTCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCCGCGCAgtacgta                                                  >  2:659373/1‑224 (MQ=255)                                                                                                                                                                         cgtcgCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCCGCGCAGTACGTACCTGCTCGCAATa                                     >  1:384675/1‑235 (MQ=255)                                                                                                                                                                                    aCTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGtg                                                                                           >  2:408706/1‑169 (MQ=255)                                                                                                                                                                                      ttCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCcg                                                             >  2:499732/1‑198 (MQ=255)                                                                                                                                                                                      ttCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCCGCGCAGTACGTACCTGCTCGCAATAGCGCAAGCGCCGCa                       >  1:184363/1‑236 (MQ=255)                                                                                                                                                                                                 aTGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGcc                                                              <  2:144895/186‑1 (MQ=255)                                                                                                                                                                                                       cgtGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCCGCGCAGTACGTACCTGCTCGCAATAGCGCAAGCGCCGCAGGCATGcgcg             <  1:454179/229‑1 (MQ=255)                                                                                                                                                                                                        gtGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGcc                                                              <  2:593500/179‑1 (MQ=255)                                                                                                                                                                                                        gtGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCCGCGCAGTACGTACCTGCTCGCAATAGCGCAAGCGCCGCAGGCATGCGCggcaagtg      <  1:454146/235‑7 (MQ=255)                                                                                                                                                                                                           gcgcAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCCGCGCAGTACGTACCTGCTCGCAATAGCGCAAGCGCCGCAGGCATGCGCGGGCCTGGTCGc  <  1:499733/236‑1 (MQ=255)                                                                                                                                                                                                            cgcAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCCGCGCAGTACGTACCTGCTCGCAATAGCGCAAGCGCCGCAGGCATg                 >  1:499258/1‑220 (MQ=255)                                                                                                                                                                                                             |                                                                                                                                                                                                                                          ACGCATCGTTCACGTAGCGGGTGCCTTGTTCAGCGCCAGCCGCTTCTTCCTGCAGGCTGGTGAGCTGGGTACCTTCGTGACACAGGCTGATCACGCGCCAGTGAACATTGAGGTCTTCCCGCGGGTGGCCGACGAGGGTGAAGCTCAGGCCTGTCTGCAGGCGCACATCGTCGCCCTGCACTTCAGCCAGGCATGCGTCGTGGCGCAGCGCCGTCAGCCGTGTTTCAGTGAAGGGCTTGCCCACCGCATCGCGCTTGTAGCGCCCCGGGTAATCAAAGCGCTCGTAGTCCAGTGACTGGTGCGTGACGCCACTGGTCTGGGCCTTGTGCTCCTGCCGGTAGGCCGGGTTGGTGAAGGTGTAGTCGCGCTGCACTTGCCGCGCAGTACGTACCTGCTCGCAATAGCGCAAGCGCCGCAGGCATGCGCGGGCCTGGTCGC  >  AE015451/4562756‑4563193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.