New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5680623 =	40 (1.000)	6 (0.160)	4/324	NT	13.7%	coding (679/720 nt)	rsmE	16S rRNA m3U1498 methyltransferase
	?	AE015451	5680692 =	37 (0.960)					coding (591/618 nt)	PP_4986	Channel protein, hemolysin III family

ACCCACCCGTGACCCTGGCCGAATGGTTGAGCAGCACCAAGGCTGACCTGAAGCTGGTCCTGCACCCGGTGGCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCGACGGTGTAGAACACGCCGCCGGCAGCCAGCCAGGCGAAGCCGGCCGTGCCCAGCGAGTTCAGCAGCGGCTTG  >  AE015451/5680393‑5680854                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                        gctccgaggcgcggatcctgtcgatcatcatctatgcggtaatgggctggatcgtgctggtggcagtcaagccgctgctgaactcgctgggcacggccggcttcgcctggctggctgccggcggcgtgttctacaccgtcggcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcacttcGTGgc                                                                                                                                                                                                                                     >  1:658296‑M1/231‑235 (MQ=255)                    cGAATGGTTGAGCAGCACCAAGGCTGACCTGAAGCTGGTCCTGCACCCGGTGGCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGt                                                                                                                                                                                                                            >  1:607944/1‑225 (MQ=255)                          gTTGAGCAGCACCAAGGCTGACCTGAAGCTGGTCCTGCACCCGGTGGCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTggg                                                                                                                                                                                                           >  1:506791/1‑236 (MQ=255)                          agtGAGCAGCACCAAGGCTGACCTGAAGCTGGTCCTGCCCCCGGTGGCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            <  1:178075/233‑1 (MQ=255)                               gcagcaCCAAGGCTGACCTGAAGCTGGTCCTGCACCCGGTGGCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGAc                                                                                                                                                                                                      >  1:351734/1‑236 (MQ=255)                                      ggtaatgggctggatcgtgctggtggcagtcaagccgctgctgaactcgctgggcacggccggcttcgcctggctggctgccggcggcgtgttctacaccgtcggcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcccttcGTg                                                                                                                                                                                                                                       <  2:506790‑M1/3‑1 (MQ=255)                                       gtaatgggctggatcgtgctggtggcagtcaagccgctgctgaactcgctgggcacggccggcttcgcctggctggctgccggcggcgtgttctacaccgtcggcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcacttcGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAAc                                                                                                                                                                                               >  1:391424‑M1/193‑235 (MQ=255)                                                 tGAAGCTGGTCCTGCACCCGGTGGCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGca                                                                                                                                                                                                                        >  1:190203/1‑200 (MQ=255)                                                           ccTGCACCCGGTGGCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGaca                                                                                                                                                                            >  1:657318/1‑234 (MQ=255)                                                                     aagccgctgctgaactcgctgggcacggccggctgcgcctggctggctgccggcggcgtgttctacaccgtcggcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcacttcGTGgc                                                                                                                                                                                                                                     >  2:33840‑M1/163‑167 (MQ=255)                                                                      tGGCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGCCTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTg                                                                                                                                                               >  1:114969/1‑236 (MQ=255)                                                                       ggCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTg                                                                                                                                                               >  1:453865/1‑235 (MQ=255)                                                                         cgctgctgaactcgctgggcacggccggcttcgcctggcgggctgccggcggcgtgttctacaccgtcggcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcacttcGTGgcg                                                                                                                                                                                                                                    >  1:221434‑M1/159‑164 (MQ=255)                                                                                    aTCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGc                                                                                                                                                    <  2:385153/233‑1 (MQ=255)                                                                                      gctgggcacggccggcttcgcctggctggctgccggcggcgtgttctacaccgtcggcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcacttcGTGGCGCTGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            >  1:88422‑M1/146‑175 (MQ=255)                                                                                             gAAAAGCCCGCCCCCCTGGCCGTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTg                                                                                                                                                                                                                           <  2:175057/153‑1 (MQ=255)                                                                                                             tGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGatg                                                                                                                          <  2:351733/234‑1 (MQ=255)                                                                                                                   tCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGatgccatgcc                                                                                                                   >  1:683922/1‑235 (MQ=255)                                                                                                                      tGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGc                                                                                                                                                       <  1:690331/196‑1 (MQ=255)                                                                                                                       gATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGCGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGGCTTTTAACTAGCGCACGTAGAGCGacc                                                                                                                                                                            >  2:164083/1‑173 (MQ=255)                                                                                                                                 gAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAg                                                                                                                                                         >  1:517540/1‑183 (MQ=255)                                                                                                                                 gAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACgg                                                                                                     >  1:426980/1‑235 (MQ=255)                                                                                                                                     gcggcCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCCCGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTCAACTAGCCCACGTAGAGCGa                                                                                                                                                                              <  1:455454/158‑1 (MQ=255)                                                                                                                                     cgggcCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCAc                                                                                                                                                                     <  2:334541/165‑1 (MQ=255)                                                                                                                                          cTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCAc                                                                                                                                                                     <  2:490810/162‑1 (MQ=255)                                                                                                                                          cTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCAc                                                                                                                                                                     >  1:490811/1‑162 (MQ=255)                                                                                                                                              gcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcacttcGTGGCGCTGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            <  1:293689‑M1/30‑1 (MQ=255)                                                                                                                                              gcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcacttcGTGGCGCTGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            >  2:293688‑M1/90‑119 (MQ=255)                                                                                                                                              gcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcacttcGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACt                                                                                                                                                                                              <  1:644514‑M1/44‑1 (MQ=255)                                                                                                                                              gcatcattttcttcgccttcgacagccgtttccgccactggcatggcatctggcacctgttcgtcatcgctggcagcctgatgcacttcGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACt                                                                                                                                                                                              >  2:644513‑M1/90‑133 (MQ=255)                                                                                                                                                         gTCGAGCCGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            <  2:159174/108‑1 (MQ=255)                                                                                                                                                         gTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGc                                                                            <  1:723527/236‑1 (MQ=255)                                                                                                                                                            gAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCg                                                                          <  1:568449/235‑1 (MQ=255)                                                                                                                                                                 ggCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGCAACGGCt                                                                                                   >  1:234584/1‑205 (MQ=255)                                                                                                                                                                  gCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGc                                                                            <  1:283156/227‑1 (MQ=255)                                                                                                                                                                      gaGCCGCCGGGTTCCACGCAGAACGCCGTGGCCCGCGCGTGCTGCGCACCGAGGCCGCGCCGGTGGTGGAGCGGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            <  2:185725/94‑1 (MQ=255)                                                                                                                                                                               gCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCGACGGTGTAGAACAcgccgc                                                       >  1:440899/1‑235 (MQ=255)                                                                                                                                                                                           caCGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCGACGGTGTAGAACAcgcc                                                         <  2:657317/221‑1 (MQ=255)                                                                                                                                                                                              cctggggCCCGCGCGGGCGGCGCACCGAGACCGCGCGGGTGGGGGCGCTGTCGGTGGCACAGCAGTTGGGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGa                                                                                                                            <  2:173019/146‑1 (MQ=255)                                                                                                                                                                                               ccTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTg                                                                                                               >  1:173019/1‑163 (MQ=255)                                                                                                                                                                                                 ttGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            <  1:724449/68‑1 (MQ=255)                                                                                                                                                                                                 ttGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            >  2:724448/1‑68 (MQ=255)                                                                                                                                                                                                 ttGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGatgccatg                                                                                                                     >  2:719695/1‑155 (MQ=255)                                                                                                                                                                                                   ggCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCGACGGTGTAGAaca                                                             >  2:747997/1‑209 (MQ=255)                                                                                                                                                                                                      ccGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCGACGGTGTAGAACACGCCGCCGGCAGCCAGCCAGGCGAAgccg                                >  1:697775/1‑235 (MQ=255)                                                                                                                                                                                                                  cgcgCCGAGACCGCGCCGGTGGTGGCGCTGGCGGGGGCCCAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAAc                                                                                                                                      <  2:162381/121‑1 (MQ=255)                                                                                                                                                                                                                  cgcACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCGACGGTGTAGAACACGCCGCCGGCAGCCAGCCAGGCGAAGCCGGCCGTGCCCAg                     >  1:269260/1‑234 (MQ=255)                                                                                                                                                                                                                       cGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGAACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGc                                                                            <  1:55569/174‑1 (MQ=255)                                                                                                                                                                                                                          gaCCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            <  2:209862/43‑1 (MQ=255)                                                                                                                                                                                                                          gaCCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTgg                                                                                                                                                                                                            >  1:209862/1‑43 (MQ=255)                                                                                                                                                                                                                                  cGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGAAGACGAACAGGTACCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAatga                                                                               >  2:410629/1‑160 (MQ=255)                                                                                                                                                                                                                                    gtggtgGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCGACGGTGTAGAACACGCCGCCGGCAGCCAGCCAGGCGAAGCCGGCCGTGCCCAGCGAGTTCAGCAGCGGCtt   <  2:697774/234‑1 (MQ=255)                                                                                                                                                                                                                                    gtggtgGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCGACGGTGTAGAACACGCCGCCGGCAGCCAGCCAGGCGAAGCCGGCCGTGCCCAGCGAGTTCAGCAGCGGCTTg  <  1:330007/235‑1 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                        ACCCACCCGTGACCCTGGCCGAATGGTTGAGCAGCACCAAGGCTGACCTGAAGCTGGTCCTGCACCCGGTGGCTGAGCCGCTTATCAGCCATGAAAAGCCCGCCACCCTGGCCTTCGTGATCGGCCCCGAAGGCGGCCTTAGCGAAGCCGAGGTCGAGCAGGCCAAAGCCGCCGGCTTCCACGCAGCACGCCTTGGCCCGCGCGTGCTGCGCACCGAGACCGCGCCGGTGGTGGCGCTGTCGGTGGCACAGCAGTTGTGGGGCGACTTTTAACTAGCGCACGTAGAGCGACACCGCCACGAAGTGCATCAGGCTGCCAGCGATGACGAACAGGTGCCAGATGCCATGCCAGTGGCGGAAACGGCTGTCGAAGGCGAAGAAAATGATGCCGACGGTGTAGAACACGCCGCCGGCAGCCAGCCAGGCGAAGCCGGCCGTGCCCAGCGAGTTCAGCAGCGGCTTG  >  AE015451/5680393‑5680854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.