New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5950286	35 (0.880)	3 (0.080)	3/326	NT	7.2%	coding (1003/1503 nt)	ppx	exopolyphosphatase
	?	AE015451	= 5950293	43 (1.110)					coding (1010/1503 nt)	ppx	exopolyphosphatase

CAAACCAGACCGCCGCGCTATCTTCCCGGCGGGCTTGGCGATTCTCGAAGCGATCTTCGATGCCCTTGAACTGAACCGCATGGACCACTGCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCATTATCACTACCACAAGCACGGCGCCTATCTGATCGAGCACTCGGACCTGGCAGGCTTTTCCCGGGAAGATCAGCAGATGATGGCCCTGCTGGTACGCGGCCACC  >  AE015451/5950072‑5950517                                                                                                                                                                                                                       |                                                                                                                                                                                                                                        cAAACCAGACCGCCGCGCTATCTTCCCGGCGGGCTTGGCGATTCTCGAAGCGATCTTCGATGCCCTTGAACTGAACCGCATGGACCACTGCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGtcg                                                                                                                                                                                                                     >  1:600062/1‑233 (MQ=255)                cgcTATCTTCCCGGCGGGCTTGGCGATTCTCGAAGCGATCTTCGATGCCCTTGAACTGAACCGCATGGACCACTGCGACGGCGCCCTGCGCGAAGGTGTGCTGCTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCAc                                                                                                                                                                                                                  >  1:258254/1‑223 (MQ=255)                                               gAAGCGATCTTCGATGCCCTTGAACTGAACCGCATGGACCACTGCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCAc                                                                                                                                                                                                                  >  2:579563/1‑192 (MQ=255)                                               gAAGCGATCTTCGATGCCCTTGAACTGAACCGCATGGACCACTGCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCAc                                                                                                                                                                                                                  <  1:579564/192‑1 (MQ=255)                                                     aTCGTCGATGCCCTCGAACTGAACCGCATGGACCACTGCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGc                                                                                                                                                                                                 <  2:454794/203‑1 (MQ=255)                                                        ttCGATGCCCTTGAACTGAACCGCATGGACCACTGCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGAGCAAGGCGTTGCACGCATTCGACCAGGTGGCCg                                                                                                                                                                                               >  2:305910/1‑202 (MQ=255)                                                          cGATGCCCTTGAACTGAACCGCATGGACCACTCCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGTCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCt                                                                                                                                                                                  >  2:708359/1‑213 (MQ=255)                                                             tGCCCTTGAACTGAACCGCATGGACCACTGCGACGGCGCCCTGCGCGCAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAgcgcagcctggccctggtcc                                                                                                                                                                                                              >  1:291702‑M2/1‑162 (MQ=255)                                                                  ttGAACGGAACCGCATGGACCACTGCGCCGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACgg                                                                                                                                                                         <  1:124250/214‑1 (MQ=255)                                                                    gaacggaacCGCATGGACCACTGCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCCATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTActgggct                                                                                                                                                  <  1:223516/235‑1 (MQ=255)                                                                                       aCTGCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAATGCGtg                                                                                                                                                                                                                      >  1:20841/1‑147 (MQ=255)                                                                                                gcgcCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTg                                                                                                                     >  1:399886/1‑236 (MQ=255)                                                                                                 cgcCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGc                                                                                                                                                                                                                    >  2:709349/1‑140 (MQ=255)                                                                                                 cgcCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGc                                                                                                                                                                                                                    <  1:709350/140‑1 (MQ=255)                                                                                                  gcCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTgg                                                                                                                    <  2:399885/235‑1 (MQ=255)                                                                                                         gcgAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTg                                                                                                              >  2:457889/1‑234 (MQ=255)                                                                                                                    ccgTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTgg                                                                                                                    <  1:40678/215‑1 (MQ=255)                                                                                                                      gTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCAtt                                                                                                        <  2:583669/227‑1 (MQ=255)                                                                                                                        tCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGgc                                                                                                                                                                 <  2:512744/168‑1 (MQ=255)                                                                                                                          gATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAgcgcagcctggccctggtccacgtgatagcgct                                                                                                                                                                                                 >  2:300915‑M2/1‑101 (MQ=255)                                                                                                                          gATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAgcgcagcctggccctggtccacgtgatagcgct                                                                                                                                                                                                 <  1:300916‑M2/134‑34 (MQ=255)                                                                                                                            tCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCAGAc                                                                                                                                                                                             >  1:141139/1‑136 (MQ=255)                                                                                                                             cgcgcagggcgccACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGaaa                                                                                                                                       >  1:467/10‑189 (MQ=255)                                                                                                                               gCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCt                                                                                                                                                                                          <  1:237212/136‑1 (MQ=255)                                                                                                                               gCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCt                                                                                                                                                                                          >  2:237212/1‑136 (MQ=255)                                                                                                                                         caccaccacGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCATTATCa                                                                                                    >  1:713783/1‑212 (MQ=255)                                                                                                                                           ccaccacGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGgc                                                                                                                                                                 <  2:276469/149‑1 (MQ=255)                                                                                                                                           ccaccacGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGgc                                                                                                                                                                 >  1:276470/1‑149 (MQ=255)                                                                                                                                                     gACGTGCGCGAGCGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACa                                                                                                                 <  1:274459/187‑1 (MQ=255)                                                                                                                                                            gcgAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCATTATCACTACCACAAGCACGGCGCCTATCTGATCGAGCACTCGGACCTg                                                         >  1:524056/1‑236 (MQ=255)                                                                                                                                                            gcgAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCGGGGCCGCGAAAGGGCACGAAATCGGGCGGGACATTGCCCATTATCACTACCACAAGCACg                                                                                      >  2:244717/1‑207 (MQ=255)                                                                                                                                                                        tGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCGGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACg                                                                                                                                <  2:712108/153‑1 (MQ=255)                                                                                                                                                                         gAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCATTATCACTACCACaa                                                                                           <  2:373074/189‑1 (MQ=255)                                                                                                                                                                                cTGAGGGAGCGCTATCACGCGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCAtt                                                                                                        <  2:180509/169‑1 (MQ=255)                                                                                                                                                                                       aGCGCTATCACGTGGACCAGGGCCAGGCTGCGCtcgacgcgcgcagcctggccctggtccacgtgatagcgctccatcagcgagttcagggtgcgttcgcgcacgtcttcgtggtggtggcggccaagcagatc                                                                                                                                    >  2:300915‑M1/1‑33 (MQ=255)                                                                                                                                                                                       aGCGCTATCACGTGGACCAGGGCCAGGCTGCGCtcgacgcgcgcagcctggccctggtccacgtgatagcgctccatcagcgagttcagggtgcgttcgcgcacgtcttcgtggtggtggcggccaagcagatc                                                                                                                                    <  1:300916‑M1/134‑102 (MQ=255)                                                                                                                                                                                            tATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCATTATCACTACCACAAGCACGGCGCCTATCTGATCGAGCACTCGGACCTGGCa                                                      >  2:298822/1‑207 (MQ=255)                                                                                                                                                                                                    ggACCAGGGCCAGGCTGCGCtcgacgcgcgcagcctggccctggtccacgtgatagcgctccatcagcgagttcagggtgcgttcgcgcacgtcttcgtggtggtggcggccaagcagatcgaacagcacacctgcgcgcagggcgccgtcgcagtggtccatgcggttcagttcaagggca                                                                       >  1:291702‑M1/1‑20 (MQ=255)                                                                                                                                                                                                        cAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGCGCTGGACATTGCCCATTATCACTACCACAAGCACGgcc                                                                                   >  2:15403/1‑165 (MQ=255)                                                                                                                                                                                                         aGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCATTATCACTACCACAAGCACGGCGCCTATCTGATCGAGCACTCGGACCTGGCAGGCTTTTCCCGGGAAGATCAGCAGATGATGGCCCTGCTgg              >  2:591359/1‑234 (MQ=255)                                                                                                                                                                                                           ggCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCATTATCACTACCACAAGCACGGCGCCTATCTGa                                                                          <  1:305911/172‑1 (MQ=255)                                                                                                                                                                                                                   tGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCATTATCACTACCACAAGCACGGCGCCTATCTGATCGAGCACTCGGACCTGGCAGGCTTTTCCCGGGAAGATCAGCAGATGATGGCCCTGCTGGTACGCGGCCAcc  >  1:51064/1‑236 (MQ=255)                                                                                                                                                                                                                       |                                                                                                                                                                                                                                        CAAACCAGACCGCCGCGCTATCTTCCCGGCGGGCTTGGCGATTCTCGAAGCGATCTTCGATGCCCTTGAACTGAACCGCATGGACCACTGCGACGGCGCCCTGCGCGAAGGTGTGCTGTTCGATCTGCTTGGCCGCCACCACCACGAAGACGTGCGCGAACGCACCCTGAACTCGCTGATGGAGCGCTATCACGTGGACCAGGGCCAGGCTGCGCGCGTCGAGCGCAAGGCGTTGCACGCATTCGACCAGGTGGCCGACGCTTGGAACCTGAAAGACGGAAACTGGCGCGATCTACTGGGCTGGGCCGCGAAAGTGCACGAAATCGGGCTGGACATTGCCCATTATCACTACCACAAGCACGGCGCCTATCTGATCGAGCACTCGGACCTGGCAGGCTTTTCCCGGGAAGATCAGCAGATGATGGCCCTGCTGGTACGCGGCCACC  >  AE015451/5950072‑5950517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.