| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 206,311 | G→C | 10.0% | V3939V (GTG→GTC) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 206,311 | 0 | G | C | 10.0% | 176.3 / 7.6 | 58 | V3939V (GTG→GTC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base G (23/29); new base C (2/4); total (25/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATC > AE015451/206086‑206515 | cGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGAc > 1:536065/1‑228 (MQ=255) gCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAggcg < 1:449493/235‑1 (MQ=255) gagaCCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCgag < 1:576676/216‑1 (MQ=255) gagaCCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCgag > 2:576675/1‑216 (MQ=255) tGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGCCGGTGACCGACGGCGGCga > 2:42661/1‑189 (MQ=255) aaGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGa > 1:232815/1‑207 (MQ=255) gATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGAGGACAGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACCTACACCa > 1:404216/1‑193 (MQ=255) gACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGc < 1:581155/236‑1 (MQ=255) aCGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGc < 1:9831/235‑1 (MQ=255) gTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGc < 2:738085/233‑1 (MQ=255) tACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACcaacaa < 2:624417/200‑1 (MQ=255) tACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGAc < 1:693466/236‑1 (MQ=255) cTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTCGTGGCCAAGTTGACCGCCACCCCGTCGGTCACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCAATcaa < 1:269616/208‑1 (MQ=255) cTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTCGTGGCCAAGTTGACCGCCACCCCGTCGGTCACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCAATcaa > 2:269615/1‑208 (MQ=255) tGGCCACATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGGACCTTCGAGAACCTGTAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAgg < 2:714437/153‑1 (MQ=255) aGCCTGGGCAGCGCGTCTGCTGTGGATGTAGACGGTCGCACCGTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGc < 1:153078/209‑1 (MQ=255) tGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGc < 2:260607/205‑1 (MQ=255) gggCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCCGACcaaca > 1:216364/1‑173 (MQ=255) tgGATGTAGACGGGCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCaacaac < 2:239356/179‑1 (MQ=255) gTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGc < 2:702558/163‑1 (MQ=255) gTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGc > 1:702559/1‑163 (MQ=255) gTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCg > 1:643231/1‑165 (MQ=255) aGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATc < 1:259033/166‑1 (MQ=255) cGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACaaa > 2:684781/1‑148 (MQ=255) tCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAggcggc > 2:296585/1‑112 (MQ=255) tCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAggcggc < 1:296586/112‑1 (MQ=255) gCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATca > 2:159541/1‑159 (MQ=38) gaCCGTCGAGAACCGGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTAcc < 1:53700/228‑1 (MQ=25) cACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGGCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTg > 1:582562/1‑187 (MQ=25) ccTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTgg < 2:328476/231‑1 (MQ=35) cTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGAccacca > 2:181319/1‑137 (MQ=37) ttCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGc < 1:599590/236‑1 (MQ=39) ttCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGc < 1:187225/236‑1 (MQ=37) cgcGAGAACCTGCAACTGGGCGGCAACGCCTCGGTCCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATc < 2:89191/151‑1 (MQ=9) agaACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGcc < 2:61311/208‑1 (MQ=14) aCTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAAcc < 2:241289/146‑1 (MQ=37) aCTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAAcc > 1:241289/1‑146 (MQ=37) tGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTCGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAATGGCACCGTGGGTACTGccactgtcactg < 2:277945/231‑12 (MQ=11) gcAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCgg < 2:658150/231‑1 (MQ=25) gCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCt < 1:536868/235‑1 (MQ=21) ggTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTgg < 2:643230/197‑1 (MQ=37) aCCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGa > 1:126988/1‑236 (MQ=38) caccacCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCt > 1:559630/1‑235 (MQ=39) ccGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTg > 1:364701/1‑231 (MQ=39) cgacgaAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAggcggc > 2:722248/1‑52 (MQ=38) cgacgaAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAggcggc < 1:722249/52‑1 (MQ=35) tggtggCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAATACGTTCTGCCGATCAACAAcc < 2:79710/99‑1 (MQ=255) gtggCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGc < 2:409027/64‑1 (MQ=255) gtggCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGCGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTACGTc > 1:77316/1‑204 (MQ=38) ccAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTg < 2:339203/116‑1 (MQ=37) ccAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTg > 1:339204/1‑116 (MQ=35) aaGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTa > 2:266709/1‑194 (MQ=39) aaGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGTACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCg > 1:742259/1‑217 (MQ=18) gCTGACCGCGACCCCGTCGGTGAc < 2:483282/24‑1 (MQ=255) gACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGc > 2:388484/1‑118 (MQ=35) gACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGc < 1:388485/118‑1 (MQ=35) cgACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTg > 1:148938/1‑209 (MQ=38) ccGTCGGTCACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATc < 1:195763/213‑1 (MQ=21) | CGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGTACCGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATC > AE015451/206086‑206515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |