| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 1,617,614 | G→A | 7.4% | G44G (GGC→GGT) | PP_1417 ← | putative Tricarboxylate transport protein TctB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 1,617,614 | 0 | G | A | 7.4% | 165.6 / 2.2 | 52 | G44G (GGC→GGT) | PP_1417 | putative Tricarboxylate transport protein TctB |
| Reads supporting (aligned to +/- strand): ref base G (24/24); new base A (2/2); total (26/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.30e-01 | |||||||||||
CGTACAGCCGAGCCATGGGCAGGCCGACCAGGATGGCGCTGAGGATGAAGCCGAGCGCTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCC > AE015451/1617382‑1617849 | cGTACAGCCGAGCCATGGGCAGGCCGACCAGGATGGCGCTGAGGATGAAGCCGAGCGCTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGcc < 1:733680/235‑1 (MQ=255) gCCGAGCCATGGGCAGGCCGACCAGGATGGCGCTGAGGATGAAGCCGAGCGCTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGcc < 1:155839/229‑1 (MQ=255) gACCAGGATGGCGCTGAGGATGAAGCCGAGCGCTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCt > 2:446232/1‑236 (MQ=255) tGAGGATGAAGCCGAGCGCTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGCATGCAGCCTGAt > 1:728825/1‑225 (MQ=255) gATGAAGCCGAGCGCTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCAt < 2:312325/203‑1 (MQ=255) ccGAGCGCTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCa < 2:109838/187‑1 (MQ=255) gcTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACgg > 2:522861/1‑226 (MQ=255) gcTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACgg < 1:522862/226‑1 (MQ=255) gcTGCGAAAGGGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGggcgg < 1:184515/235‑1 (MQ=255) gAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCGCCGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATa < 1:247714/175‑1 (MQ=255) cagGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGaaaa < 1:9702/236‑1 (MQ=255) cacaGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTg > 1:529272/1‑169 (MQ=255) gTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGc < 1:577843/155‑1 (MQ=255) gTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGc > 2:577842/1‑155 (MQ=255) tctcG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTg > 1:471656/1‑236 (MQ=255) g‑cgGTCCAGTTCCGGTTCGTCAGCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGgaga < 2:43221/131‑1 (MQ=255) cgGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGGTCATTgggg > 2:641281/1‑220 (MQ=255) aGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGt < 2:611954/114‑1 (MQ=255) aGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGt > 1:611955/1‑114 (MQ=255) tCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTg < 1:20477/222‑1 (MQ=255) cGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGa > 1:379719/1‑210 (MQ=255) cGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATCGGAGAATGCAGCCTGATAGGGCCGGGCCATCACGGCCAGggcggcc > 2:83881/1‑154 (MQ=255) cGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTg > 2:298469/1‑221 (MQ=255) cGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAAt < 2:323347/233‑1 (MQ=255) tCCTTGCGCACGATGGGCGTTGGGCGGAACACCCGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCCTTGGGGAATCCGCGTTGGGATTGCTCAAGTGa > 2:629998/1‑225 (MQ=255) tCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATcc < 1:701730/236‑1 (MQ=255) ccTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCGGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGcc < 2:221532/91‑1 (MQ=255) ttGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACgg < 2:654152/136‑1 (MQ=255) cACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGc > 2:248736/1‑165 (MQ=255) aCGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATg < 1:404162/103‑1 (MQ=255) aCGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATg > 2:404161/1‑103 (MQ=255) gggCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCGTCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGct > 1:374002/1‑231 (MQ=255) cacCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGggccaggcc < 2:154198/103‑1 (MQ=255) gTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGaa < 1:735228/236‑1 (MQ=255) gcagGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTga > 2:581412/1‑235 (MQ=255) ccATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGa > 2:683627/1‑191 (MQ=255) ccATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGc > 1:469363/1‑236 (MQ=255) aTCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTg > 2:598418/1‑233 (MQ=255) aGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGc > 2:64616/1‑83 (MQ=255) ggCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCt < 2:495021/60‑1 (MQ=255) ggCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCt > 1:495022/1‑60 (MQ=255) aCCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGCTTGCTCAAGTGAAAGGCAAATCCTGTGGGAGCGGCCGTGCGGCGCGATCGGgcggg > 2:219141/1‑201 (MQ=255) cagcagCGGGTAAGCGCGCGGACCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAAt > 1:685410/1‑160 (MQ=255) cagcagCGGGTAAGCGCGCGGACCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAAt < 2:685409/160‑1 (MQ=255) cagcagCGGGTAAGCGCGCGGACCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCACCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGc < 1:306922/226‑1 (MQ=255) cagcagCGGGTAAGCGCGCGGACCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCACCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGc > 2:306921/1‑226 (MQ=255) aaGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCg > 1:334386/1‑211 (MQ=255) gcgcgcGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCg < 1:396191/236‑1 (MQ=255) cgcgGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGc > 2:199889/1‑169 (MQ=255) cgGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCtgt < 1:581413/236‑1 (MQ=255) cgGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTAGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCtgt < 1:446233/236‑1 (MQ=255) cgGGACCACCGGTTCAGAGGAGAATGAAGACGGAGAGGGCCAGGCAATCACGGCCAGGGCGGCACACATCGACAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAg < 2:72405/136‑1 (MQ=255) gCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGcc > 1:693633/1‑236 (MQ=255) | CGTACAGCCGAGCCATGGGCAGGCCGACCAGGATGGCGCTGAGGATGAAGCCGAGCGCTTCGAAAGTGGCGGCGAAGACGATCAGCAGGCCGACACAGGCGGTGATCTTGATCAGGGTCTCG‑CGGTCCAGTTCCGGTTCGTCATCCTTGCGCACGATGGGCGTTGGGCGGAACACCAGGTACAGCAGGCCCAGCCCCATCAGGCCGAGCACCAGCAGCGGGTAAGCGCGCGGGCCCACCGGTTCATAGGAGAATGCAGCCTGATAGGGCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCC > AE015451/1617382‑1617849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |