| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 4,907,411 | Δ1 bp | 6.7% | coding (378/939 nt) | PP_4316 ← | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 4,907,411 | 0 | C | . | 6.7% | 205.3 / 8.4 | 60 | coding (378/939 nt) | PP_4316 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| Reads supporting (aligned to +/- strand): ref base C (30/26); new base . (2/2); total (32/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.69e-01 | |||||||||||
ACGGCTTCAGCCAAGTGTCGGGGGCTGTCGTACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATAGCCCCAGCGGCCCACG > AE015451/4907208‑4907635 | aCGGCTTCAGCCAAGTGTCGGGGGCTGTCGTACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTTCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCTCGTGCTGGCA‑TCCgc > 1:314614/1‑218 (MQ=255)aCGGCTTCAGCCAAGTGTCGGGGGCTGTCGTACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCgca > 1:692270/1‑235 (MQ=255) aaGTGTCGGGGGCTGTCCTACCAGGCATAGGGCACATCCTGGCGTGCTCTGCGGGTGTGGTAGCTGACCTGCACGTCGAAGCCCAAGTGGGCCCGCTTGGCTATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACTAGGTTCCATTCACCGCGCCGCGTGCTGGCa < 2:599616/201‑1 (MQ=255) tgtCGGGGGCTGTCGTACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCcagcagcag < 1:739223/236‑1 (MQ=255) tCGGGGGCTGTCGTACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCTGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGgc < 1:611924/201‑1 (MQ=255) tCGGGGGCTGTCGTACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTg < 2:1065505/193‑1 (MQ=255) tCGGGGGCTGTCGTACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGgc > 2:611923/1‑201 (MQ=255) tACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCCTTCACCGCGCCGCGTGCTGGCA‑t > 1:305843/1‑184 (MQ=255) tACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTgg < 2:492991/181‑1 (MQ=255) tACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGGGTGGTc > 1:364357/1‑236 (MQ=255) ccAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGt < 2:644495/174‑1 (MQ=255) ggCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCAccgcgccgc > 2:752743/1‑169 (MQ=255) aTAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTTTGGTCGGCGACgg > 1:1059431/1‑236 (MQ=255) ccTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGCTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCgggggct > 2:115634/1‑176 (MQ=255) gTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCg > 1:456989/1‑236 (MQ=255) cggtgCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGACCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGccc < 1:873447/229‑1 (MQ=255) tgtgCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGgcg < 1:1050531/235‑1 (MQ=255) gtgCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCAtt > 1:303899/1‑224 (MQ=255) tgCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTgg < 2:560571/150‑1 (MQ=255) tgCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAgg > 1:725568/1‑197 (MQ=255) cGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTTACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGgcg < 1:659585/231‑1 (MQ=255) ggCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGc < 1:85530/190‑1 (MQ=255) tgGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACCCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCcagcag > 2:11486/1‑179 (MQ=255) gTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTTTGGTCGGCGACGGCCGCGGCATTGGCCCCg < 2:1059430/220‑1 (MQ=255) gCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGAt > 2:273211/1‑153 (MQ=255) gCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTa > 2:672908/1‑236 (MQ=255) gCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCG‑ATGCCAGCACGCGGCGCGGGGGATGTCGCGCAGCAGCGCcagcagcag < 2:500017/177‑1 (MQ=255) gCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCG‑ATGCCAGCACGCGGCGCGGGGGATGTCGCGCAGCAGCGCcagcagcag > 1:500018/1‑177 (MQ=255) tGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCgcagc > 1:260209/1‑152 (MQ=255) ccAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAgcggcggcg > 1:1071841/1‑236 (MQ=255) ccAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAgcggcggcg > 1:258451/1‑236 (MQ=255) caggTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCcgcg < 2:401414/219‑1 (MQ=255) tGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGTGCAGCAGCGCcagcagcag < 2:847804/152‑1 (MQ=255) gCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGAc > 1:1091688/1‑235 (MQ=255) tCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCg < 2:811312/176‑1 (MQ=255) cgaggccgagAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCa < 1:1025955/235‑1 (MQ=255) aggccgagAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCa > 2:976854/1‑186 (MQ=255) aaTGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCG‑ATGCCAGCACGCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAgatgactgtct > 1:854496/1‑230 (MQ=255) aTGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTc < 2:494364/194‑1 (MQ=255) cTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTaa > 2:1063757/1‑234 (MQ=255) ccACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCG‑ATGCCAGCACGCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGcc < 2:854495/200‑1 (MQ=255) cACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGGCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACgg > 2:353017/1‑147 (MQ=255) aCCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACg > 2:276546/1‑108 (MQ=255) gAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTg < 1:526756/209‑1 (MQ=255) gCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCCGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAgcg > 2:60132/1‑151 (MQ=255) gATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCa > 2:49778/1‑106 (MQ=255) gATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATa > 1:1086861/1‑236 (MQ=255) tAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGa > 1:1093933/1‑162 (MQ=255) tAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATAGc > 2:684823/1‑236 (MQ=255) aCCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATAGccc < 1:202680/236‑1 (MQ=255) cGGTTCCATTCACCGCGCCGCGTGCTgg < 2:239613/28‑1 (MQ=255) tCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATAGCCCCAGCGGc > 1:559219/1‑236 (MQ=255) ccATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATAGCCCCAGCGGc < 1:273212/235‑1 (MQ=255) aTTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCg < 1:619127/212‑1 (MQ=255) aTTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCg > 2:619126/1‑212 (MQ=255) aTTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGACAGCCCCAGCGGCCCa > 1:390477/1‑236 (MQ=255) ttCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAgatga < 2:451978/182‑1 (MQ=255) tCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATAGCCCCAGCGGCCCACg < 1:459539/236‑1 (MQ=255) tCACCGCGCCGCGTGCTGCCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCTGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATAGCCCCAGCGGCCCACg < 1:605430/236‑1 (MQ=255) tCACCGCGCCGCGTGCGGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGt < 2:806256/157‑1 (MQ=255) aCCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATAGc > 1:1039495/1‑220 (MQ=255) cgcgcggcgTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGc < 2:381596/149‑1 (MQ=255) | ACGGCTTCAGCCAAGTGTCGGGGGCTGTCGTACCAGGCATAGGGCACATCCTGGCGTGCTGTGCGGCTGTGGTAGCTGACGTGCATGTCGAAGCCCAAGTGGGCCCGCTTGGCGATCGCCAGCCCCACTGCGCCGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCA‑TCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACGGCCGCGGCATTGGCCCCGGCGCCATTGGTGACGGTTATGCCGCGGGCAGCGGCGGCGGCCAGGTCGACCTGCTCGTAGCCGGCGCCAATCACGCAGATGATCTGCAATCTGGGTAATGCGTCAATTTCGGTGGCGGATAGCCCCAGCGGCCCACG > AE015451/4907208‑4907635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |