| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 181541 | NA (NA) | 5 (0.080) | 4/336 | NT | NA | intergenic (+7/‑126) | PP_23SB/PP_r01 | 23S ribosomal RNA/5S ribosomal RNA |
| ? | AE015451 | = 529682 | NA (NA) | intergenic (+18/‑102) | PP_23SC/PP_5SC | 23S ribosomal RNA/5S ribosomal RNA | |||||
TCTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/181303‑181541‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGCAATGCCACTGGCGT < AE015451/529682‑529451 TCTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC < 1:129505/236‑1TCTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 1:140440/1‑236TCTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 1:977495/1‑236TCTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 1:758490/1‑236TCTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 1:694517/1‑236 CTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCA > 1:142143/1‑236 CTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCA < 1:165961/236‑1 CTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCA > 1:185041/1‑236 CTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCA > 1:580018/1‑236 CTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC < 1:878465/235‑1 GGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 2:391885/1‑233 TGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGTTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCT > 1:146785/1‑236 tgCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGC < 1:292113/234‑1 GGCAGTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGGAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGC < 1:857582/217‑1 CATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGATCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCaac > 1:41557/1‑215 ACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATATCACCCACGCAATCTG > 1:26534/1‑183 AAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAct > 2:41320/1‑170 TAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATC > 2:763619/1‑166 TCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTATTTGCCCGTGAGGCTTGACCATATAACACCCAAGCAAT > 2:51360/1‑137 ATCCCCTAAGGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACTCAAGCA > 2:705796/1‑118 CGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCT > 1:396183/1‑214 GTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAAT > 1:8030/1‑77 GTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAAT < 2:8030/77‑1 GCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCCACGTCGTAGTCTTCGACGGCCCTTTAGGGGCTTCAAGATCCCAGTGAGATCTCATCTTGCGGCAAGTTTCCC > 1:219087/1‑223 GCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCGTAGCAGATTGCTTGAGCGTTATATGGTCAAGCGTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACA > 1:459025/1‑139 TAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCT > 1:733920/1‑236 TGAGGCTTGACCATATAACACCCAAGCAATCTGCGTAGCAGATTGCTTGGGTGTTGTATGGTCAAGCATCACG > 2:1010586/1‑73 CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTCGTCTTCGAC > 2:256629/1‑120 CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTATGGGATTCACGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGCAATACCACTGGCGT > 1:373839/1‑236 CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTT > 2:127302/1‑187 CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTT < 1:127302/187‑1 AATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCGTCACGGGCAATTAGTATTGGTTAGC > 2:357021/1‑66 AATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGCAATGCCACTGGCtt < 1:699466/235‑3 AATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGCAATGCCA > 1:199583/1‑228 AATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCT > 1:26848/1‑159 AATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGACCCCAGAGAGATCTCATCTTGA > 2:29373/1‑162 AATCTGCGTAGCAGATTGCTTGGGCGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGCAATGCAACTGG > 2:785487/1‑232 TCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCT < 2:858517/197‑1 TCTGGTGTTCCGGTTGTCACGCCAGTGGCATTGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/181303‑181541‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCATCTTGAGGCAAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGCAATGCCACTGGCGT < AE015451/529682‑529451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |