New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	300399 =	63 (1.020)	3 (0.050)	3/328	NT	5.4%	coding (727/2586 nt)	yhgF	putative transcriptional accessory protein
	?	AE015451	300509 =	45 (0.760)					coding (617/2586 nt)	yhgF	putative transcriptional accessory protein

CGAGGAACAGGGCAAGCTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/300640‑300399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggccgGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCAGCTTGATCTCGCGGGCCAGTTCCGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGAAAGGATGCTGG  >  AE015451/300509‑300659                                                                                                                                                                                                                                                                                                                                                                                                           CGAGGAACAGGGCAAGCTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCA                                                                                                                                                               <  1:404727/236‑1                              TGGCCCGCGAGACCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCG                                                                                                                                                         <  1:537829/213‑1                                                                                                                                                        GATGGCCTGTTCAACGCCCCGCCCCGGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCACCGCCGAAAGGGGCGTGGCCGACGTCAAGGCCGGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGA                                                                                         <  1:213940/155‑1                                                                                                                                                                                CTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCGGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCAGCTTGATCTCGCGGGCCAGCTCCGGGGTCAGCTTGCCCTGTTCCT                       >  1:791505/1‑197                                                                                                                                                                                                                CAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCGGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCcg                                                                   >  2:22548/1‑119                                                                                                                                                                                                                                             AGGCCGGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCAGCTTGATCTCGCGGGCCAGTTCCGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGAAAGGATGCTGG  <  2:218049/157‑1                                                                                                                                                                                                                                                                                                                                                                                                           CGAGGAACAGGGCAAGCTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/300640‑300399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggccgGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCAGCTTGATCTCGCGGGCCAGTTCCGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGAAAGGATGCTGG  >  AE015451/300509‑300659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.