New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	503644 =	38 (0.610)	9 (0.150)	8/326	NT	23.7%	coding (675/828 nt)	PP_0414	Polyamine ABC transporter, permease protein
	?	AE015451	503701 =	22 (0.380)					coding (732/828 nt)	PP_0414	Polyamine ABC transporter, permease protein

TGGTATCAATTGGTGTCGACCAACGCAACCTGTGCCGGCCTCTTCCGGCTTTAGCCGCGAAGAGGCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/503882‑503644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgcggcGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTC  >  AE015451/503701‑503865                                                                                                                                                                                                                                                                                                                                                                                                                      TGGTATCAATTGGTGTCGACCAACGCAACCTGTGCCGGCCTCTTCCGGCTTTAGCCGCGAAGAGGCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCG                                                                                                                                                                           <  1:411927/235‑1                 CGACCAACGCAACCTGTGCCGGCCTCTTCCGGCTTTAGCCGCGAAGAGGCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCG                                                                                                                                                                   >  1:477343/1‑227                                           tgCCGGCTTTAGCCGCGAAGAGGCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTG                                                                                                                                                                              <  1:287239/188‑1                                              CGGCTTTAGCCGCGAAGAGGCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGC                                                                                                                                                                             >  2:488029/1‑188                                              CGGCTTTAGCCGCGAAGAGGCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGC                                                                                                                                                                             <  1:488030/188‑1                                                   TTAGCCGCGAAGCGGCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGC                                                                                                                                                                       <  1:161509/189‑1                                                            AAGAGGCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTG                                                                                                                                                          <  2:623510/193‑1                                                                 GCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTG                                                                                                                                                          <  2:477342/188‑1                                                                                   TCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCG                                                                                                                                                                           <  1:882493/153‑1                                                                                   TCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCG                                                                                                                                                                           >  2:882492/1‑153                                                                                               CTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCT                                                                                                                                <  1:1011273/184‑1                                                                                                                      TACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTGATTGCGTT                                                                                                                                                  <  1:117081/143‑1                                                                                                                           CCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCGGAACATCTGCCGCGGCGGCGGCCTTGCTGATTGAGTTCTCGGT                                                                                                                                            >  2:227477/1‑144                                                                                                                                                  CAGCAACACCACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCG                                                                                                                                                                           <  2:26206/90‑1                                                                                                                                                                      CAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGCAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGC                                                           >  1:363441/1‑182                                                                                                                                                                                                 gGGTCGGGCTCAGGTTCTCGCGAAGTGCGCTGAACCTCTGCCGCGGCGGCGCCCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTT                                                                        <  2:557390/141‑1                                                                                                                                                                                                   GTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGT                                                                                                                     <  2:154933/95‑1                                                                                                                                                                                                                              CTGAACAGCTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGTCCCTGGAGTGGTT                                                                                                                 <  1:530352/72‑1                                                                                                                                                                                                                                         gCGCGGCGCCGCCCTTGCGGGTGGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTT                                                                        <  2:763961/101‑1                                                                                                                                                                                                                                         CCGCGGCGGCGACCTTGCTGAGTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCg                                                                             <  1:311008/97‑2                                                                                                                                                                                                                                            CGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTC  <  2:762108/169‑1                                                                                                                                                                                                                                               CGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGTGCGTAGCGAGAAGCTGATGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTG     <  1:371639/163‑1                                                                                                                                                                                                                                                                                                                                                                                                                      TGGTATCAATTGGTGTCGACCAACGCAACCTGTGCCGGCCTCTTCCGGCTTTAGCCGCGAAGAGGCCGGTACAGGCAAGCCATCATCAAGCCGGCTGTTGAGTCCTCAGCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/503882‑503644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgcggcGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTC  >  AE015451/503701‑503865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.