New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 601414	41 (0.660)	5 (0.090)	5/324	NT	11.8%	coding (765/1137 nt)	ribD	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase
	?	AE015451	= 601573	36 (0.620)					coding (924/1137 nt)	ribD	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase

TGAAAGCCAGTGGATCACCGGCCCGGCCGCCCGCTCAGCCGTGCAGCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/601171‑601414 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccggcACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGGCCAGAGCGTGAAGCAGCGCCCCCAGGTCGACCTGGCCATTGTCGCCCGGCAAGCTGAGCAATTCGTGGCCGGCAGCGGCATAGCGCGGGTCATCTGCGACAGCAGTCACCACCAGAGCCGGGCCGGCCTGGAAGAACGGCGCCGCCAGGGGCAGGCGCAGACGGCCATCGACCAGCACCCGCAAGGGTGTGCGG  <  AE015451/601573‑601342                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGAAAGCCAGTGGATCACCGGCCCGGCCGCCCGCTCAGCCGTGCAGCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTC                                                                                                                                                                                                                                                   >  1:255318/1‑235                  CCGCCCCGGCCGCCCGCTCAGCCGTGCAGCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCG                                                                                                                                                                                                                                            <  1:380899/225‑1                                       CCGTGCAGCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCG                                                                                                                                                                                                                                            <  1:120874/204‑1                                             AGCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGC                                                                                                                                                                                                      <  1:495378/236‑1                                                                 AGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCG                                                                                                                                                                                                                                            <  2:1097056/178‑1                                                                                                               GCATGACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCC                                                                                                                                                                                                                                                  <  1:703656/126‑1                                                                                                               GCATGACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCC                                                                                                                                                                                                                                                  >  2:703655/1‑126                                                                                                                    ACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAACCTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGGCCAGAGCGTGAAGCAGCGCCCCCAGGTCGACCTGGCCATTGTCGCCCGGCAAGCTGAGCAATTCGTGGC                                                                                                                               <  1:157981/236‑1                                                                                                                                                                                                               TGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGG                                                                                                                                                                                                    >  1:119733/1‑76                                                                                                                                                                                                               TGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGG                                                                                                                                                                                                    <  2:119733/76‑1                                                                                                                                                                                                                              CGGCGCCGTTCTTCCAGGCCGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGGCCAGAGCGTGAAGCAGCGCCCCCAGGTCGACCTGGCCATTGTCGCCCGGCA                                                                                                                                                 >  2:481125/1‑112                                                                                                                                                                                                                                         TTCCAGGCCGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGGCCAGAGCGTGAAGCAGCGCCCCCAGGTCGACCTGGCCATTGTCGCCCGGCAAGCTGAGCAATTCGTGGCCGGCCGCGGCATAGCGCGGGTCATCTGCGACAGCAGTCACCACCAGAGCCGGGCCGGCCTG                                                                  >  1:485271/1‑180                                                                                                                                                                                                                                           CCAGGCCGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGGCCAGAGCGTGAAGCAGCGCCCCCAGGTCGACCTGGCCATTGTCGCCCGGCAAGCTGAGCAATTCGTGGCCGGCAGCGGCATAGCGCGGGTCATCTGCGACAGCAGTCACCACCAGAGCCGGGCCGGCCTGGAAGAACGGCGCCGCCAGGGGCAGGCGCAGACGGCCATCGACCAGCACCCG               >  1:86534/1‑229                                                                                                                                                                                                                                            CAGGCCGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGGCCAGAGCGTGAAGCAGCGCCCCCAGGTCGACCTGGCCATTGTCGCCCGGCAAGCTGAGCAATTCGTGGCCGGCAGCGGCATAGCGCGGGTCATCTGCGACAGCAGTCACCACCAGAGCCGGGCCGGCCTGGAAGAACGGCGCCGCCAGGGGCAGGCGCA                                     >  1:469163/1‑206                                                                                                                                                                                                                                                 CGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGGCCAGAGCGTGAAGCAGCGCCCCCAGGTCGACCTGGCCATTGTCGCCCGGCAAGCTGAGCAATTCGTGGCCGGCAGCGGCATAGCGCGGGTCATCTGCGACAGCAGTCACCACCAGAGCCGGGCCGGCCTGGAAGAACGGCGCCGCCAGGGGCAGGCGCAGACGGCCATCGACCAGCACCCGCAAGGGTGTGCGG  <  1:596168/236‑1                                                                                                                                                                                                                                                 CGGCACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGGCCAGAGCGTGAAGCAGCGCCCCCAGGTCGACCTGGCCATTGTCGCCCGGCAAGCTGAGCAATTCGTGGCCGGCAGCGGCATAGCGCGGGTCATCTGCGACAGCAGTCACCACCAGAGCCGGGCCGGCCTGGAAGAACGGCGCCGCCAGGGGCAGGCGCAGACGGCCATCGACCAGCACCCGCAAGGGTGTGCGG  >  1:793324/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGAAAGCCAGTGGATCACCGGCCCGGCCGCCCGCTCAGCCGTGCAGCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCGTGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/601171‑601414 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccggcACCGGCTTCCAGCAGGATTTCGTTGACGCCGCGGGCGGCCAGAGCGTGAAGCAGCGCCCCCAGGTCGACCTGGCCATTGTCGCCCGGCAAGCTGAGCAATTCGTGGCCGGCAGCGGCATAGCGCGGGTCATCTGCGACAGCAGTCACCACCAGAGCCGGGCCGGCCTGGAAGAACGGCGCCGCCAGGGGCAGGCGCAGACGGCCATCGACCAGCACCCGCAAGGGTGTGCGG  <  AE015451/601573‑601342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.