New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 615343 | 47 (0.760) | 3 (0.050) | 3/312 | NT | 6.7% | coding (143/243 nt) | xseB | Exodeoxyribonuclease 7 small subunit |
? | AE015451 | = 615327 | 41 (0.730) | coding (159/243 nt) | xseB | Exodeoxyribonuclease 7 small subunit |
TCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/615129‑615343 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagggcgccctggcCCAGGCCGAACAGAAGGTGCAAATTCTGCTGGAGCGCGACGGCGAACTGGCTGCCCAACCCTTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGACGCAGCCCTCGAACCGCTGTTCATCGCCCCGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTGCGCCCGTTGCTGGC < AE015451/615327‑615095 TCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCT < 2:1108893/212‑1 GTTCGAGGGCTGCGTCGACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGC < 2:670070/138‑1 TGGTAGGTGCCACTCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGCCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGCCCTGGGCCAGGGCGCCCTGGCCCAGGCCGAACAGAAGGTGCAAATTCTGCTGGAGCGCGACG < 2:322672/155‑1 GTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCCCAGGCCGAACAGAAGGTGCAAATTCTGCTGGAGCGCGACGGCGAACTGGCTGCCCAACCCTTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGACGCAGCCCTC < 1:1007479/207‑1 GTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCCCATGCCGAACAGAAGGTGCAAATTCTGCTGGAGCGCGACGGCGAACTGGCTGCCCAACCCTTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGC > 2:1007478/1‑171 AGGGCGCCCTGGCCCAGGCCGAACAGAAGGTGCAAATTCTGCTGGAGCGCGACGGCGAACTGGCTGCCCAACCCTTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGACGCAGCCCTCGAACCGCTGTTCATCGCCCCGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTCCAGCGTGATGAACGGCG > 1:153053/1‑221 GGGCGCCCTGGCCCAGGCCGAACAGAAGGTGCAAATTCTGCTGGAGCGCGACGGCGAACTGGCTGCCCAACCCTTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGACGCAGCCCTCGAACCGCTGTTCATCGCCCCGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTG > 2:969657/1‑231 GGCGCCCTGGCCCAGGCCGAACAGAAGGTGCAAATTCTGCTGGAGCGCGACGGCGAACTGGCTGCCCAACCCTTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGACGCAGCCCTCGAACCGCTGTTCATCGCCCCGAGCACAGAGCTGGAACGCCTTTACGCCGCCAT > 1:790839/1‑196 GCCCAGGCCGAACAGAAGGTGCAAATTCTGCTGGAGCGCGACGGCGAACTGGCTGCCCAACCCTTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGACGCAGCCCTCGAACCGCTGTTCATCGCCCCGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTGCGCCCGTTGCTGGC > 1:1033648/1‑235 TCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/615129‑615343 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagggcgccctggcCCAGGCCGAACAGAAGGTGCAAATTCTGCTGGAGCGCGACGGCGAACTGGCTGCCCAACCCTTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGACGCAGCCCTCGAACCGCTGTTCATCGCCCCGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTGCGCCCGTTGCTGGC < AE015451/615327‑615095 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |