New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 779916	63 (1.020)	4 (0.070)	4/328	NT	6.0%	coding (555/954 nt)	PP_0670	Transporter, bile acid/Na+ symporter family
	?	AE015451	= 779919	65 (1.100)					coding (552/954 nt)	PP_0670	Transporter, bile acid/Na+ symporter family

AATCACCGGCAGCAAACGGTCGAAATCACGCAGTACCACGTCAATCTGCGAAGCGATCACCACCATCAGCACCAAGGCCATGGCCGGCACCGGCAACCACGCCCAGGCGTCGTTCCAGGTCGCGACTGCGCGCGAGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/779775‑779916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgccggTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTGATTCCGGTATACATCGGCTTCATGCTGCTGGCGCCGGTGCTCGGCTTCATCTGTGCGCGCCTGCTGCGCCTGCCGGCCAGCGAGGCACGCTCG  <  AE015451/779919‑779685                                                                                                                                                                                                                                                                                                                                                                                           AATCACCGGCAGCAAACGGTCGAAATCACGCAGTACCACGTCAATCTGCGAAGCGATCACCACCATCAGCACCAAGGCCATGGCCGGCACCGGCAACCACGCCCAGGCGTCGTTCCAGGTCGCGACTGCGCGCGAGCGC                                                                                                                                                                                                                                                >  2:469632/1‑139                                 GTACCACGTCAATCTGCGAAGCGATCACCACCATCAGCACCAAGGCCATGGCCGGCACCGGCAACCACGCCCAGGCGCCGTTCCAGGCCGCGACCGCGCGCGACCGC                                                                                                                                                                                                                                                >  2:91316/1‑107                                                                         CAAGGCCATGGCCGGCACCGGCAACCACGCCCAGGCGTCGTTCCAGGTCGCGACTGCGCGCGAGCGCCGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATC                                                                                                                                                  >  1:575594/1‑161                                                                                                ACCACGCCCAGGCGTCGTTCCAGGTCGCGACTGCGCGCGAGCGCCGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCC                                                                                                   >  1:861427/1‑185                                                                                                ACCACGCCCAGGCGTCGTTCCAGGTCGCGACTGCGCGCGAGCGCCGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCC                                                                                                   <  2:861426/185‑1                                                                                                                    CAGGTCGCGACTGCGCGCGAGCGCCGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGGCGCCTGGGCGTGGTTGCCGGTGCC                                                                                                                                                                                 >  2:1123545/1‑87                                                                                                                                       AGCGCCGGTGCCCGGCGCTCGCGCGCAGTCGCGCCCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGTCGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTGATTCCGGTATACATCG                                                                               <  2:348944/166‑1                                                                                                                                            CGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTGATTCCGGTATACATCGGCTTCATGCTGCTGGCGCCGGTGCTCGGCTTCATCTGTGCGCGC                                   >  2:439888/1‑205                                                                                                                                            CGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTGATTCCGGTATACATCGGCT                                                                            <  1:588023/164‑1                                                                                                                                            CGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTGATTCCGGTATACATCGGCT                                                                            >  2:588022/1‑164                                                                                                                                            CGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTGATTCCGGTAT                                                                                     >  1:53816/1‑155                                                                                                                                            CGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTGATTCCGGTAT                                                                                     <  2:53816/155‑1                                                                                                                                            CGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTG                                                                                               >  1:364039/1‑145                                                                                                                                            CGGTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTG                                                                                               <  2:364038/145‑1                                                                                                                                              GTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTGATTCCGGTATACATCGGCTTCATGCTGCTGGCGCCGGTGCTCGGCTTCATCTGTGCGCGCCTGCTGCGCCTGCCGGCCAGCGAGGCACGCTCG  >  1:895577/1‑236                                                                                                                                                                                                                                                                                                                                                                                           AATCACCGGCAGCAAACGGTCGAAATCACGCAGTACCACGTCAATCTGCGAAGCGATCACCACCATCAGCACCAAGGCCATGGCCGGCACCGGCAACCACGCCCAGGCGTCGTTCCAGGTCGCGACTGCGCGCGAGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/779775‑779916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgccggTGCCCGGCGCTCGCGCGCAGTCGCGACCTGGAACGACGCCTGGGCGTGGTTGCCGGTGCCGGCCATGGCCTTGGTGCTGATGGTGGTGATCGCTTCGCAGATTGACGTGGTACTGCGTGATTTCGACCGTTTGCTGCCGGTGATTCCGGTATACATCGGCTTCATGCTGCTGGCGCCGGTGCTCGGCTTCATCTGTGCGCGCCTGCTGCGCCTGCCGGCCAGCGAGGCACGCTCG  <  AE015451/779919‑779685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.