New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	907868 =	69 (1.120)	3 (0.050)	3/320	NT	5.1%	coding (343/777 nt)	yjjV	putative hydrolase
	?	AE015451	908152 =	47 (0.820)					coding (59/777 nt)	yjjV	putative hydrolase

GGTGGTGCTGGGGGTGTACCAGGCGAATTTCCAGCGGGTGTGGGAACTGGCCTGCGCCGAGCCGCGCCTGTTCGCCGCGCTTGGCCTGCACCCGGTCTACCTCGACCAGCATCGCCCTGAGCACCTGGTGCAACTGCGCGAGTGGCTGGAGCGCCTGCGCGACAACCCGCGGCTATGTGCCGTAGGTGAGTTCGGCCTGGACTATTACCTCGCAGACCTTGACAAGACCCGCCAGCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/908109‑907868 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcaggcgcGGGCGGTCGGCGTCGAAGTCGGGGAAGTCCAGGTGGGTGTGGGTGTCGATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAA  >  AE015451/908152‑908377                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGTGGTGCTGGGGGTGTACCAGGCGAATTTCCAGCGGGTGTGGGAACTGGCCTGCGCCGAGCCGCGCCTGTTCGCCGCGCTTGGCCTGCACCCGGTCTACCTCGACCAGCATCGCCCTGAGCACCTGGTGCAACTGCGCGAGTGGCTGGAGCGCCTGCGCGACAACCCGCGGCTATGTGCCGTAGGTGAGTTCGGCCTGGACTATTACCTCGCAGACCTTGACAAGACCCGCCAG                                                                                                                                                                                                                                           >  1:97006/1‑235                                                                         CGCCGCGCTTGGCCTGCACCCGGTCTACCTCGACCAGCATCGCCCTGAGCACCTGGTGCAACTGCGCGAGTGGCTGGAGCGCCTGCGCGACAACCCGCGGCTATGTGCCGTAGGGGAGGTCGGCCTGGACTATTACCTCGCAGCCCTTGACAAGACCCGCCAGCAGG                                                                                                                                                                                                                                       >  2:385042/1‑167                                                                          GCCGCGCTTGGCCTGCACCCGGTCTACCTCGACCAGCATCGCCCTGAGCACCTGGTGCAACTGCGCGAGTGGCTGGAGCGCCTGCGCGACAACCCGCGGCTATGTGCCGTAGGTGAGTTCGGCCTGGACTATTACCTCGCAGACCTTGACAAGACCCGCCAGCAG                                                                                                                                                                                                                                        <  1:864462/165‑1                                                                                CTTGGCCTGCACCCGGTCTACCTCGACCAGCATCGCCCTGAGCACCTGGTGCAACTGCGCGAGTGGCTGGAGCGCCTGCGCGACAACCCGCGGCTATGTGCCGTAGGTGAGTTCGGCCTGGACTATTACCTCGCAGACCTTGACAAGACCCGCC                                                                                                                                                                                                                                             <  2:743717/154‑1                                                                                                 CTACCTCGACCAGCATCGCCCTGAGCACCTGGTGCAACTGCGCGAGTGGCTGGAGCGCCTGCGCGACAACCCGCGGCTATGTGCCGTAGGTGAGTTCGGCCTGGACTATTACCTCGCAGACCTTGACAAGACCCGCCAGCAGGCGC                                                                                                                                                                                                                                    >  2:948979/1‑146                                                                                                                                                                                                                CCTCGCAGACCTTGACAAGACCCGCCAGCAGGCGCGGGCGGTCGGC                                                                                                                                                                                                                         <  2:471559/46‑1                                                                                                                                                                                                                      AGACCTTGACAAGACCCGCCAGCAGGCGCGGGCGGTCGGCGTCGAAGTCGGGGAAGTCCAGGTGG                                                                                                                                                                                                <  1:923841/65‑1                                                                                                                                                                                                                      AGACCTTGACAAGACCCGCCAGCAGGCGCGGGCGGTCGGCGTCGAAGTCGGGGAAGTCCAGGTGG                                                                                                                                                                                                >  2:923840/1‑65                                                                                                                                                                                                                                       GCCAGCAGGCGCGGGCGGTCGGCGTCGAAGTCGGGGAATTCCAGGTGGGTGTGGGTGTCGATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGC                                                           <  2:571183/181‑1                                                                                                                                                                                                                                          AGCAGGCGCGGGCGGTCGGCGTCGAAGTCGGGGAAGTCCAGGTGGGTGTGGGTGTCGATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAA  >  1:902874/1‑235                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGTGGTGCTGGGGGTGTACCAGGCGAATTTCCAGCGGGTGTGGGAACTGGCCTGCGCCGAGCCGCGCCTGTTCGCCGCGCTTGGCCTGCACCCGGTCTACCTCGACCAGCATCGCCCTGAGCACCTGGTGCAACTGCGCGAGTGGCTGGAGCGCCTGCGCGACAACCCGCGGCTATGTGCCGTAGGTGAGTTCGGCCTGGACTATTACCTCGCAGACCTTGACAAGACCCGCCAGCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/908109‑907868 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcaggcgcGGGCGGTCGGCGTCGAAGTCGGGGAAGTCCAGGTGGGTGTGGGTGTCGATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAA  >  AE015451/908152‑908377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.