New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1025267 =	60 (0.970)	13 (0.250)	8/290	NT	21.2%	intergenic (‑121/+108)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter ‑ periplasmic binding protein
	?	AE015451	1025360 =	46 (0.880)					intergenic (‑214/+15)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter ‑ periplasmic binding protein

GCCCAGCAGCGGCTCAAGCAGCAGGTACCGATTACGCCGGTGGCGCATTCCATCGTGAGCCAGCCGCTTAGCGTCAAGGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1025515‑1025267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcttgcccgcgaagaggccGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTTGACCAGGCTGTCGTACTGC  >  AE015451/1025360‑1025588                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCCCAGCAGCGGCTCAAGCAGCAGGTACCGATTACGCCGGTGGCGCATTCCATCGTGAGCCAGCCGCTTAGCGTCAAGGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCT                                                                                                                                                                                                                                                       >  2:1073849/1‑233   CCAGCAGCGGCTCAAGCAGCAGGTACCGATTACGCCGGTGGCGCATTCCATCGTGAGCCAGCCGCTTAGCGTCAAGGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGC                                                                                                                                                                                                                                                    >  2:635000/1‑234     AGCAGCGGCTCAAGCAGCAGGTACCGATTACGCCGGTGGCGCATTCCATCGTGAGCCAGCCGCTTAGCGTCAAGGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCT                                                                                                                                                                                                                                                       >  1:547384/1‑229                                       GGTGGCGCATTCCATCGTGAGCCAGCCGCTTAGCGTCAAGGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAG                                                                                                                                                                                                                                                                 >  2:204264/1‑185                                                                                                                     TTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAAC                                                                                                                                                                                                               <  2:803348/157‑1                                                                                                                        cTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTTCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGA                                                                                                                                                                                                                                           <  1:40029/125‑1                                                                                                                                                             GGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACT                                                                                                                                                                                                            >  2:928258/1‑120                                                                                                                                                                CTCTTCGCGGGCAAGCCCCCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGC                                                                                                                                                 <  1:347220/176‑1                                                                                                                                                                 TCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCG                                                                                                                                                                                                                                               >  1:40339/1‑81                                                                                                                                                                                  GCTGCCTCAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGCGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTCACGCT                                                                                                                                                                                                                       <  2:875992/88‑1                                                                                                                                                                                                   ACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTt                                                        >  1:1025576/1‑229                                                                                                                                                                                                        TTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGC                                                                           >  1:959873/1‑206                                                                                                                                                                                                        TTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGC                                                                                   >  2:773811/1‑198                                                                                                                                                                                                         TCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACG                                             >  1:269915/1‑235                                                                                                                                                                                                         TCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTA                                               >  2:717100/1‑233                                                                                                                                                                                                         TCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGC                                                  >  2:1005419/1‑230                                                                                                                                                                                                         TCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTG                                                                     >  1:809625/1‑211                                                                                                                                                                                                         TCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTA                                                                                                                                                                                                                     >  1:809060/1‑67                                                                                                                                                                                                         TCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTA                                                                                                                                                                                                                     <  2:809059/67‑1                                                                                                                                                                                                                                GGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTT                     <  1:473580/236‑1                                                                                                                                                                                                                                     GGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCT                                                                               <  2:856789/173‑1                                                                                                                                                                                                                                     GGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTC                                                                                                                                                                                                           <  1:1037295/49‑1                                                                                                                                                                                                                                       GCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTTGACCAG               >  1:870582/1‑235                                                                                                                                                                                                                                        CTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTTGACCAGGa             >  2:947917/1‑235                                                                                                                                                                                                                                        CTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGT                                                                   <  1:107094/182‑1                                                                                                                                                                                                                                         TTGCCAGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTTCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCG                                                                                                                      <  2:1068837/130‑1                                                                                                                                                                                                                                             CCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCT                               <  1:251409/213‑1                                                                                                                                                                                                                                              CGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTG                                                                              >  1:951740/1‑165                                                                                                                                                                                                                                              CGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCG                                                                                                             <  2:831644/134‑1                                                                                                                                                                                                                                               GCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTTGACCAGGCTGTCGTA      >  1:1117568/1‑236                                                                                                                                                                                                                                               GCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCC                                                                          >  2:181518/1‑168                                                                                                                                                                                                                                                 GAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACGCCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCGCGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTT                                                    <  1:222944/188‑1                                                                                                                                                                                                                                                   AGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTTGACCAGGCTGTCGTACT    <  2:628340/234‑1                                                                                                                                                                                                                                                   AGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTTGACCAGGCTGTCG        <  1:803349/230‑1                                                                                                                                                                                                                                                    tAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTTGA                   <  1:107841/217‑1                                                                                                                                                                                                                                                     AGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTTGACCAGGCTGTCGTACTGC  <  1:971360/234‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCCCAGCAGCGGCTCAAGCAGCAGGTACCGATTACGCCGGTGGCGCATTCCATCGTGAGCCAGCCGCTTAGCGTCAAGGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1025515‑1025267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcttgcccgcgaagaggccGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCTGCTGGGCCTGCTGGTACAGGGCGGTGCGTTGCGTACGGTCGGTCACTTGCTTGGCCTGCTTGACCAGGCTGTCGTACTGC  >  AE015451/1025360‑1025588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.