New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1464311 =	53 (0.860)	3 (0.050)	3/328	NT	5.4%	coding (1307/1440 nt)	algX	Alginate biosynthesis protein AlgX
	?	AE015451	1464336 =	54 (0.920)					coding (1282/1440 nt)	algX	Alginate biosynthesis protein AlgX

AAGCCTGGCAAGAACGAGCTGATGGTCAACGGCAAGGGCGGCGTGATCAAAGACCTGATCAACCGCAACCTGCAGATGGACGTCAAGTTCGAAGATCCCTCGGTGAAGGTGTTGCAGGCCACCCTCTGGTACCTCAACGGCCGCCACGAGGACATCAAGCTGGAAAAACCGGAAACCTCCGACACCGACGGCCGCTTCGTCTTCCAGATGCGCGAAGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1464531‑1464311 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagacgaAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCAGAGGGTGGCCTGCAACACCTTCACCGAGGGATCTTCGAACTTGACGTCCATCTGCAGGTTGCGGTTGATCAGGTCTTTGATCACGCCGCCCTTGCCGTTGACCATCAGCTCGTTCTTGCC  >  AE015451/1464336‑1464525                                                                                                                                                                                                                                                                                                                                                                                                                             AAGCCTGGAAAGAACGAGCTGATGGTCAACGGCAAGGGCGGCGTGATCAAAGACCTGATCAACCGCAACCTGCAGATGGACGTCAAGTTCGAAGATCCCTCGGTGAAGGTGTTGCAGGCCACCCTCTGGTACCTCAACGGCCGCCACGAGGACATCAAGCTGGAAAAACCGGAAACCTCCGACACCGACGGCCGCTTCGTCTTCCAGATGCGCGAAGACGA                                                                                                                                                                                                <  1:485370/221‑1                GAGCTGATGATCAACGGCAAGGGCGGCGTGATCAAAGACCTGATCAACCGCAACCTGCAGATGGACGTCAAGTTCGAAGATCCCTCGGTGAAGGTGTTGCAGGCCCCCCTCTGGTACCTCAACGGCCGCCACGAGGACATCAAGCTGGAAAAACCGGAAACCTCCGACACCGACGGCCGCTTCGTCTTCCAGATGCGCGAAGACG                                                                                                                                                                                                 <  1:282166/205‑1                    TGATGGTCAACGGCAAGGGCGGCGTGATCAAAGACCTGATCAACCGCAACCTGCAGATGGACGTCAAGTTCGAAGATCCCTCGGTGAAGGTGTTGCAGGCCACCCTCTGGTACCTCAACGGCCGCCACGAGGACATCAAGCTGGAAAAACCGGAAACCTCCGACACCGACGGCCGCTTCGTCTTCCAGATGCGCG                                                                                                                                                                                                       >  2:353451/1‑195                                                                                                                        CACCCTCTGGTACCTCAACGGCCGCCACGAGGACATCAAGCTGGAAAAACCGGAAACCTCCGACACCGACGGCCGCTTCGTCTTCCAGATGCGCGAAGACGA                                                                                                                                                                                                >  2:926876/1‑102                                                                                                                                         cCGGCCGCCACGAGGACATCAAGCTGGAAAAACCGGAAACCTCCGACACCGACGGCCGCTTCGGCTTCCAGATGCGCGAAGACGA                                                                                                                                                                                                <  2:181051/84‑1                                                                                                                                                             AAGCTGGAAAAACCGGAAACCTCCGACACCGACGGCCGCTTCGTCTTTCAGATGCGCGAAGACGAAGCGGCCGTTGGTGTTGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCG                                                                                                                                              >  1:156263/1‑115                                                                                                                                                                    AAAAACCGGAAACCTCCGACACCGACGGCCGCTTCGTCTTCCAGATGCGCGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCAGAGGGTGGCCTGCAACACCTTCACCGAGGGATCTTCGAACTTGACGTCC                                                                         >  1:1101173/1‑177                                                                                                                                                                       AACCGGAAACCTCCGACACCGACGGCCGCTTCGTCTTCCAGATGCGCGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCA                                                                                                                          >  1:224425/1‑125                                                                                                                                                                                                                          ACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCAGAGGGTGGCCTGCAACACCTTCACCGAGGGATCTTCGAACTTGACGTCCATCTGCAGGTTGCGGTTGATCAGGTCTTTGATCACGCCGCCCTTGCCGTTGACCATCAGCTCGTTCTTGCC  <  2:528329/194‑1                                                                                                                                                                                                                            GAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCAGAGGGTGGCCTGCAACACCTTCACCGAGGGATCTTCGAACTTGACGTCCATCTGCAGGTTGCGGTTGATCAGGTCTTTGATCACGCCGCCCTTGCCGTTGACCATCAGCTCGTTC       <  2:61581/187‑1                                                                                                                                                                                                                                                                                                                                                                                                                             AAGCCTGGCAAGAACGAGCTGATGGTCAACGGCAAGGGCGGCGTGATCAAAGACCTGATCAACCGCAACCTGCAGATGGACGTCAAGTTCGAAGATCCCTCGGTGAAGGTGTTGCAGGCCACCCTCTGGTACCTCAACGGCCGCCACGAGGACATCAAGCTGGAAAAACCGGAAACCTCCGACACCGACGGCCGCTTCGTCTTCCAGATGCGCGAAGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1464531‑1464311 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagacgaAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCAGAGGGTGGCCTGCAACACCTTCACCGAGGGATCTTCGAACTTGACGTCCATCTGCAGGTTGCGGTTGATCAGGTCTTTGATCACGCCGCCCTTGCCGTTGACCATCAGCTCGTTCTTGCC  >  AE015451/1464336‑1464525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.