New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2051064	53 (0.860)	5 (0.090)	5/326	NT	8.9%	intergenic (‑62/+24)	PP_1825/PP_1826	conserved exported protein of unknown function/Hydrolase, isochorismatase family
	?	AE015451	= 2051065	52 (0.890)					intergenic (‑63/+23)	PP_1825/PP_1826	conserved exported protein of unknown function/Hydrolase, isochorismatase family

TGTTGGCGTTGAGTTCCTGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCCGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2050822‑2051064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcccggcAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAGGAAC  <  AE015451/2051065‑2050834                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTTGGCGTTGAGTTCCTGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCC                                                                                                                                                                                                                                                 <  1:424268/236‑1                                                                                                                                                                          TTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGCATTCGACCTGCTGCTGCCCATCGGGTTCCGCCCGGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGGCGAATTCCGGATATCCACCGAGGAGAGCGGAGTGAA                                                                                                                                                                      >  2:631773/1‑142                                                                                                                                                                                     TTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCCGCCCGGCAGCCGGGCGGAACC                                                                                                                                                                                                                            >  2:395354/1‑77                                                                                                                                                                                                          TCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCCGCCCGGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAG                                                                                                                                                                     >  2:651277/1‑111                                                                                                                                                                                                                    GACCTGCTGCTGCCCATCGGGATCCGCCCGGCAGCCGGGCGCAACCCGCTGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAG                                                                                                                                                                                    >  2:513191/1‑86                                                                                                                                                                                                                              tcCCCATCGGGTTCCGCCCGGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCTAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGC                                          <  1:631774/212‑1                                                                                                                                                                                                                                       GGTTCCGCCCGGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGC                                                                         >  1:449910/1‑174                                                                                                                                                                                                                                             GCCCGGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAG      >  1:1105998/1‑235                                                                                                                                                                                                                                                 GGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAGGAAC  >  1:904105/1‑235                                                                                                                                                                                                                                                 GGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAGGAA   <  2:388686/234‑1                                                                                                                                                                                                                                                 GGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAGGA    >  2:640434/1‑233                                                                                                                                                                                                                                                 GGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTG                              >  2:859903/1‑207                                                                                                                                                                                                                                                 GGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGCATTGCTGGCCATGG                                               >  2:341578/1‑190                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTTGGCGTTGAGTTCCTGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCCGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2050822‑2051064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcccggcAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAGGAAC  <  AE015451/2051065‑2050834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.