New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2309090 =	57 (0.920)	5 (0.090)	5/326	NT	8.1%	coding (932/960 nt)	PP_2032	putative ATPase
	?	AE015451	2309250 =	59 (1.010)					coding (772/960 nt)	PP_2032	putative ATPase

GGCCACCCGCACCCCGGCCAAGTTCGACACCGAGCTGGCCGACTGGATCGCCTACGGCGCCAGCCCGCGTGGCTCCATCTCGCTGGACCGCTGCGCGCGTGCCCATGCCTGGCTGGCCGGGCGCGACTTCGTCAGCCCCGAAGACATCCAGGCCGTGCTGTTCGACGTACTGCGCCACCGCATCATCCTCTCGTTCGAGGCCGAGGCGGCAGGGATCGACCAGGACCGCGTGGTCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2309329‑2309090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtccagcgAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGCCATGTACAGGCCAAGGATTTCCTTGCGCGCGGCGAAGATGGCCTGTTGGCTGACCCGGCGTTCAGGCTTGGTCTCGCCGCCCAGGGCTTCACCCCGGGCCTGCGCCAGGATG  >  AE015451/2309250‑2309479                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGCCACCCGCACCCCGGCCAAGTTCGACACCGAGCTGGCCGACTGGATCGCCTACGGCGCCAGCCCGCGTGGCTCCATCTCGCTGGACCGCTGCGCGCGTGCCCATGCCTGGCTGGCCGGGCGCGACTTCGTCAGCCCCGAAGACATCCAGGCCGTGCTGTTCGACGTACTGCGCCACCGCATCATCCTCTCGTTCGAGGCCGAGGCGGCAGGGATCGACCAGGACCGCGTGGTC                                                                                                                                                                                                                                             >  1:421156/1‑235                                                                                                   GTGCCCATGCCTGGCTGGCCGGGCGCGACTTCGTCAGCCCCGAAGACATCCAGGCCGTGCTGTTCGACGTACTGCGCCACCGCATCATCCTCTCGTTCGAGGCCGAGGCGGCAGGGATCGACCAGGACCGCGTGGTCCA                                                                                                                                                                                                                                           >  2:852745/1‑139                                                                                                                                                     CAGGCCGTGCTGTTCGACGTACTGCGCCACCGCATCATCCTCTCGTTCGAGGCCGAGGCGGCAGGGATCGACCAGGACCGCGTGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGGTCCAGTCGGCCAGCTCGGCGTCGAACTTGGCCGGGGTGCGGGTGGCCA                                                                                                                                                       >  2:353794/1‑173                                                                                                                                                       GGCCGTGCTGTTCGACGTACTGCGCCACCGCATCATCCTCTCGTTCGAGGCCGAGGCGGCAGGGATCGACCAGGACCGCGTGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTG                                                                                                                         >  1:455015/1‑201                                                                                                                                                       GGCCGTGCTGTTCGACGTACTGCGCCACCGCATCATCCTCTCGTTCGAGGCCGAGGCGGCAGGGATCGACCAGGACCGCGTGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTG                                                                                                                         <  2:455014/201‑1                                                                                                                                                                                     CATCATCCTCTCGTTCGAGGCCGAGGCGGCAGGGATCGACCAGGCCGGCGTGGGCCAG                                                                                                                                                                                                                                          >  1:688150/1‑58                                                                                                                                                                                     CATCATCCTCTCGTTCGAGGCCGAGGCGGCAGGGATCGACCAGGACCGCGTGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGGCGGCCAGGTA                                                                                                            >  1:200895/1‑184                                                                                                                                                                                                       GGCCGAGGCGGCAGGGATCGACCAGGACCGCGTGGTCCGGCGAGATGGAGCCACGCGGGCTGGCGGCGTAGGCGATCCAGTC                                                                                                                                                                                                >  1:388677/1‑82                                                                                                                                                                                                                                       ccGTCCAGCGAGAGGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGCCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCGCCACTGCGTCG                                                                                                                    <  2:664447/124‑1                                                                                                                                                                                                                                            CAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGCCATGTACAGGCCAAGGATTTCCTTGCGCGCGGCGAAGATGGCCTGTTGGCTGACCCGGCGTTCAGGCTTGGTCTCGCCGCCCAGGGCTTCACCCCGGGCCTGCGCCAGGATG  <  2:932077/235‑1                                                                                                                                                                                                                                            CAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGCCATGTACAGGCCAAGGATTTCCTTGCG                                                                                       <  1:178995/150‑1                                                                                                                                                                                                                                            CAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGCCATGTACAGGCCAAGGATTTCCTTGCG                                                                                       >  2:178995/1‑150                                                                                                                                                                                                                                              GCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGCCATGTACAGGCCAAGGATTTCCTTGCGCGCGGCGAAGATGGCCTGTTGGCTGACCCGGC                                                       <  2:524844/180‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGCCACCCGCACCCCGGCCAAGTTCGACACCGAGCTGGCCGACTGGATCGCCTACGGCGCCAGCCCGCGTGGCTCCATCTCGCTGGACCGCTGCGCGCGTGCCCATGCCTGGCTGGCCGGGCGCGACTTCGTCAGCCCCGAAGACATCCAGGCCGTGCTGTTCGACGTACTGCGCCACCGCATCATCCTCTCGTTCGAGGCCGAGGCGGCAGGGATCGACCAGGACCGCGTGGTCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2309329‑2309090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtccagcgAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGCCATGTACAGGCCAAGGATTTCCTTGCGCGCGGCGAAGATGGCCTGTTGGCTGACCCGGCGTTCAGGCTTGGTCTCGCCGCCCAGGGCTTCACCCCGGGCCTGCGCCAGGATG  >  AE015451/2309250‑2309479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.