New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2718948	50 (0.810)	3 (0.050)	3/328	NT	6.3%	coding (75/585 nt)	nfuA	Fe/S biogenesis protein NfuA
	?	AE015451	= 2719016	41 (0.700)					coding (143/585 nt)	nfuA	Fe/S biogenesis protein NfuA

GTTCAGCTACCAGTGGCTGGAGCGCGGCCTGTACCGGCGAATGCAGGCCTGGCTGGCGGCGCAACGGGGGCCGGCCCCTGAATATGCGCTTTCCCGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2718707‑2718948 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggcTTGCAGTAGGCGATGCACGTCTCGGCGTACTGGGTGCCCGGCTGGGTGATGAAAATGCGAATGCCGATGCCGGGCGTATTCTGCTTGGAGAGCAGATCGGCCAGGTAGTCATGGGCGGCGTCGGTAATGGTTATAGCGCTCATGTAGGTTCCTCACAGACTTGCG  <  AE015451/2719016‑2718852                                                                                                                                                                                                                                                                                                                                                                                                                         GTTCAGCTACCAGTGGCTGGAGCGCGGCCTGTACCGGCGAATGCAGGCCTGGCTGGCGGCGCAACGGGGGCCGGCCCCTGAATATGCGCTTTCCCGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGCTCTGCTCTCCAAGCAGAATACG                                                                                                                                                                             >  1:1095850/1‑236                                                                                                                                                  CGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCTTGCAGTAGGCGATGCACGTCTCGGCGTACTGGGT                                                                                                                                    <  1:633259/132‑1                                                                                                                                                  CGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCTTGCAGTAGGCGATGCACGTCTCGGCGTACTGGGT                                                                                                                                    >  2:633258/1‑132                                                                                                                                                                                                   GCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCTTGCAGTAGGCGATGCACGTCTCGGCGTACTGGGTGCCCGGCTGGGTGATGAAAATGCGAATGCCGATGCCGGGCGTATTCTGCTTGGAGAGCAGATCGGCAAGGTAGTCATGGGCGGCGTCGGTAATGGTTATAGCGCTCATGTAGGTT                 >  1:708069/1‑198                                                                                                                                                                                                                                       tctgCGCCCGTCTGGCAGTATGCTAGTCACGTCGCGGCGTACTGGGTGCCCGGCTGGGTGATGAAAATGCGAATGCCGATGCCGGGCGTATTCTGCTTGGAGAGCAGATCGGCCCGGTAGTCATGGGCTGCGTCGGTAATGGTTATAGCGCTCATGTAGGTTCCTCACAGACTTGCG  <  2:381762/173‑1                                                                                                                                                                                                                                                                                                                                                                                                                         GTTCAGCTACCAGTGGCTGGAGCGCGGCCTGTACCGGCGAATGCAGGCCTGGCTGGCGGCGCAACGGGGGCCGGCCCCTGAATATGCGCTTTCCCGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2718707‑2718948 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggcTTGCAGTAGGCGATGCACGTCTCGGCGTACTGGGTGCCCGGCTGGGTGATGAAAATGCGAATGCCGATGCCGGGCGTATTCTGCTTGGAGAGCAGATCGGCCAGGTAGTCATGGGCGGCGTCGGTAATGGTTATAGCGCTCATGTAGGTTCCTCACAGACTTGCG  <  AE015451/2719016‑2718852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.