| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 3209796 = | 57 (0.920) | 4 (0.070) | 4/322 | NT | 7.5% | intergenic (+57/+60) | PP_2813/PP_2814 | BNR domain protein/conserved protein of unknown function |
| ? | AE015451 | 3209843 = | 45 (0.780) | intergenic (+104/+13) | PP_2813/PP_2814 | BNR domain protein/conserved protein of unknown function | |||||
GATGCAGGCTTCGATAATCACGCCTGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGCTGGTGCGCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3210036‑3209796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccaggcaagTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGGTAGGCTTCTTCAGGCGTGATTATCGAAGCCTGCATCGGGATGGTCAGCCCGCGACGGTAATAGTCGGTGGTCA > AE015451/3209843‑3210073 GATGCAGGCTTCGATAATCACGCCTGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGGTGGTGCGCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCACAATGGCAGCTCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCCCGACCACCCATTCGCCCtg < 1:698967/236‑3 AGGCTTCGATAATCACGCCTGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGCTGGTGCGCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGC > 1:91725/1‑233 AGGCTTCGATAATAACGCCTGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGCTGGTGCGCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCA > 2:619275/1‑234 AATCACGCCTGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGCTGGTGCGCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGC < 1:537927/217‑1 TGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGCTGGTGCGCACGTTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCGTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTCCCACGACCACCCATTCGCCCAGGCAA > 1:400564/1‑216 GCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGATGGTGCCACGACCACCCATTCGCCCAGGCAAGTCAACGC > 1:970994/1‑183 GGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCAAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTG < 2:970993/175‑1 GACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCAAGTCAACGCTGGACGCTAGAGCTGAAGG < 2:195774/113‑1 TACCTCCCGCCCCAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCGACGACCACCCATTCCCCCAGGCAAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCA < 2:118735/111‑1 GCCCAGGCAAGTCAACGCTGGACGCTAGAGCGGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGGTAGGCTTCTTCAGGCGTGATTATCGAAGCCTGCATCGGGATGGTCAGCC < 1:195774/218‑1 AAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCACCGGGTAGGCTTCTTAAGGCG > 2:304488/1‑177 AAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGGTAGGCTTCTTCAGGCGTGATTATCGAAGCCTGCATCGGGATGGTCAGCCCGCGACGGTAATAGTCGGTGGTCA > 2:878878/1‑234 AAGTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGGTAGGCTTCTTCAGGC > 1:544279/1‑176 GATGCAGGCTTCGATAATCACGCCTGAAGAAGCCTACCCGTTGATCGTGCCGCTCGAGCTGGTGCGCACGCTTTCTCCGCGGGTACAGAAGATCCTCGGTTTCCGCTCCCAATACCCCAATGGCAGCCCTGGCCTTTGGCAACATAACTACGCAGACCTGGCGGATTACCTTCAGCTCTAGCGTCCAGCGTTGACTTGCCTGGGCCTGAAGGTGCCACGACCACCCATTCGCCCAGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3210036‑3209796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccaggcaagTCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTTCTGTACCCGCGGAGAAAGCGTGCGCACCAGCTCGAGCGGCACGATCAACGGGTAGGCTTCTTCAGGCGTGATTATCGAAGCCTGCATCGGGATGGTCAGCCCGCGACGGTAATAGTCGGTGGTCA > AE015451/3209843‑3210073 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |