New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3812255 =	53 (0.860)	3 (0.050)	3/326	NT	6.6%	coding (579/1185 nt)	PP_3368	Major facilitator family transporter
	?	AE015451	3812335 =	34 (0.580)					coding (659/1185 nt)	PP_3368	Major facilitator family transporter

GCAGCATGGTCGGTGCCAGGTAGCTGAACACGCAGAACATGCCGGCAAAACCGATCGAAGCGATGGCCAGCGCCATCCATACCTGTGGTAGGGCAAAGGCCTGGAGCTCCTTGCGCGGGTCGCTGCGTGTTTCGTCGTGGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3812400‑3812255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgctggCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCAAGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGGCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCTGTTCGACCGCCTGCAGTTCCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTT  >  AE015451/3812335‑3812566                                                                                                                                                                                                                                                                                                                                                                                            GCAGCATGGTCGGTGCCAGGTAGCTGAACACGCAGAACATGCCGGCAAAACCGATCGAAGCGATGGCCAGCGCCATCCATACCTGTGGTAGGGCAAAGGCCTGGAGCTCCTTGCGCGGGTCGCTGCGTGTTTCGTCGTGGCG                                                                                                                                                                                                                                              >  2:417809/1‑142                  AGGTAGCTGAACACGCAGAACATGCCGGCAAAACCGATCGAAGCGATGGCCAGCGCCATCCATACCTGTGGTAGGGCCAAGGCCTGGAGCTCCTTGCGCGGGTCGCTGCGTGTTTCGTCGTGG                                                                                                                                                                                                                                                >  2:61688/1‑123                                                                    CAGCGCCATCCATACCTGTGGTAGGGCAAAGGCCTGGAGCTCCTTGCGCGGGTCGCTGCGTGTTTCGTCGTGGCGCTGGCCATCGCTTCGATCGGTTTCGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCAAGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGGCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCT                                                                             <  1:580752/236‑1                                                                                 ACCTGTGGGAGGGCAAAGGCCTGGAGCTCCTTGCGCGGGTCGCTGCGTGTTTCGTCGTGGCGCTGGCCATCGCTTCGATCGGTTTTGCC                                                                                                                                                                                                                   <  2:427494/89‑1                                                                                          AGGGCAAAGGCCTGGAGCTCCTTGCGCGGGTCGCTGCGTGTTTCGTCGTGGCGCTGGCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACC                                                                                                                                                                                   <  2:193388/112‑1                                                                                                                                          TGGCGCTGGCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCACGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGTCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCTGTT                                                                          >  2:21120/1‑169                                                                                                                                          TGGCGCTGGCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCAAGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGGCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCTGTTCGACCGCCTGCAGTTCCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTT       >  1:34424/1‑236                                                                                                                                              GCTGGCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCAAGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGGCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCTGTTCGACCGCCTGCAGTTCCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCT   >  1:71994/1‑236                                                                                                                                              GCTGGCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCAAGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGGCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCTGTTCGACCGCCTGCAGTTCCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTAC     >  2:1102032/1‑234                                                                                                                                                TGGCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCAAGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGGCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCTGTTCGACCGCCTGCAGTTCCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCgg                >  2:720954/1‑219                                                                                                                                                TGGCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCAAGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGGCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCTGTTCGACCGCCTGCAGTTCCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTT  >  2:801257/1‑235                                                                                                                                                TGGCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCAAGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGGCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCTGTTCGACCGCCTGCAGTTCCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCC                      >  2:699361/1‑215                                                                                                                                                                                                                                                                                                                                                                                            GCAGCATGGTCGGTGCCAGGTAGCTGAACACGCAGAACATGCCGGCAAAACCGATCGAAGCGATGGCCAGCGCCATCCATACCTGTGGTAGGGCAAAGGCCTGGAGCTCCTTGCGCGGGTCGCTGCGTGTTTCGTCGTGGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3812400‑3812255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgctggCCATCGCTTCGATCGGTTTTGCCGGCATGTTCTGCGTGTTCAGCTACCTGGCACCGACCATGCTGCAAGTGACCCAGGTGTCGCCACAGTGGATTCCGTTCGGTCTGGCGGCGTTCGGCGTGGGCGGTATCGTCGGCAACATCGCTGGCGGCAAGCTGTTCGACCGCCTGCAGTTCCGCGCCGTGGGCTTGGTACTGATGTGGTCGGTCGCCGTGCTGCTGTTCTTTACCTT  >  AE015451/3812335‑3812566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.