| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 3970595 = | NA (NA) | 5 (0.090) | 5/312 | NT | NA | coding (514/1536 nt) | PP_3501 | transposase |
| ? | AE015451 | 3970611 = | NA (NA) | coding (530/1536 nt) | PP_3501 | transposase | |||||
TTTCATCAGCGTGAATCACGCCCTGGTTCAGCACCGCTTCACGTAGTGCATCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3970844‑3970595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccggtaccggcgcAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCGACTCCAGCCACTGGTCGATGCACTACGTGAAGCGGTGCTGAACCAGGGCGTGATTC > AE015451/3970611‑3970832 TTTCATCAGCGTGAATCACGCCCTGGTTCAGCACCGCTTCACGTAGTGCATCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTG > 1:469905/1‑235TTTCATCAGCGTGAATCACGCCCTGGTTCAGCACCGCTTCACGTAGTGCATCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTG > 1:246860/1‑235 TCAGCGTGAATCACGCCCTGGTTCAGCACCGCTTCACGTAGTGCATCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGG > 1:589771/1‑236 CGTGAATCACGCCCTGGTTCAGCACCGCTTCACGTAGTGCATCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGT < 2:1043896/233‑1 GTGAATCACGCCCTGGTTCAGCACCGCTTCACGTAGTGCATCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACC < 1:1108085/235‑1 GAATCACGCCCTGGTTCAGCACCGCTTCACGTAGTGCATCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACCGG > 1:749407/1‑235 CGTAGTGCATCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCG < 1:482247/199‑1 TCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTG > 1:1105768/1‑185 GGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCG < 2:497791/181‑1 CGCACACCGGTTGGTCCGCCCCACTGGGCCAAGGCCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACCGGC < 2:359155/180‑1 gcCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACCGGCGCAG < 2:15602/169‑1 aCCAAGGTCGAGCGAGAAATAGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCG < 2:615153/144‑1 CGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCT < 2:532419/176‑1 GCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGA > 2:1005156/1‑104 ACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACCGGCGCAGGTTATGGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGAGGGTGGCCAAGTTTGCC > 1:793676/1‑133 GCAAGCCTGCGGTCGGGACACCTTTGTCGATACCCTGCTCCGGTACCG > 1:569958/1‑48 AAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCCGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCCGTACCGGCAGGAGAAAATATTTG > 1:903635/1‑152 ACACCTTTGTCGATAACCTGCGCCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGC > 2:1035903/1‑149 GCGCCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACC > 2:549290/1‑150 GCCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCG > 2:1112516/1‑180 CCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCGACTCCAGCCACTGGTCGATGCACTACGTGAAGCGGTGCTGAACCAGGGCGTGATTC < 1:1131206/235‑1 CCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCG > 1:203618/1‑179 CCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGG > 1:849876/1‑173 CGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCGACTCCAGCCCCTGGTCGATG > 2:785346/1‑198 CCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGTTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGCGGGTCGGACCAACCGGTG > 2:98778/1‑169 CGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCGACTCCAGCCACTGGTCGATGCACTACGTGAAGCGGTGCTGAACCAGGGC > 1:642513/1‑221 CGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCGACTCCAGCC < 1:497792/181‑1 CAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCGACTCCAGCCACTGGTCGA > 2:1105767/1‑185 CAGGTTACCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGACCATGTGATGGTG < 2:1045480/54‑1 TTTCATCAGCGTGAATCACGCCCTGGTTCAGCACCGCTTCACGTAGTGCATCGACCAGTGGCTGGAGTCGCACACCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATCGCCAGCCCGGCGCGGCCAAAGATTTTCTCCTGCCGGTACAGCGGCAAGTGATCGGCAAACTTGGCCACCATCACATGGGCCAGCAAGCCTGCGGTCGGGACACCTTTGTCGATAACCTGCGCCGGTACCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3970844‑3970595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccggtaccggcgcAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCGACTCCAGCCACTGGTCGATGCACTACGTGAAGCGGTGCTGAACCAGGGCGTGATTC > AE015451/3970611‑3970832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |