| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 3996351 = | 52 (0.840) | 4 (0.070) | 4/332 | NT | 7.9% | intergenic (+29/+16) | PP_3523/PP_3524 | conserved protein of unknown function/conserved protein of unknown function |
| ? | AE015451 | 3996409 = | 43 (0.720) | coding (291/333 nt) | PP_3524 | conserved protein of unknown function | |||||
GAGAGCGCTCATGGAAATCGGTACGATCTGGATCATCATCGCGGCCTTGGTCATTCTGCTGGAGATCTGGGCCATCTGGCACATCATCGGCAGTGAACGGCGCGCCGAGCGCAAGATGCTGTGGATCGTCTTCGTGGTCTACGCACCCTTCCCCGGTTTGCTGTTCTGGGCCTGGCGCGGTCCGAGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAATGACGGTTTGCGGCCTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3996589‑3996351‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcggACCGCGCCAGGCCCAGAACAGCAAACCGGGGAAGGGTGCGTAGACCACGAAGACGATCCACAGCATCTTGCGCTCGGCGCGCCGTTCACTGCCGATGATGTGCCAGATGGCCCAGATCTCCAGCAGAATGACCAAGGCCGCGATGATGATCCAGATCGTACCGATTTCCATGAGCGCTCTCCCAATGGCATGTATTGGGTTGGGTTGCTGCAAGCGCTGAGGGTT > AE015451/3996409‑3996633 GAGAGCGCTCATGGAAATCGGTACGATCTGGATCATCATCGCGGCCTTGGTCATTCTGCTGGAGATCTGGGCCATCTGGCACATCATCGGCAGTGAACGGCGCGCCGAGCGCAAGATGCTGTGGATCGTCTTCGTGGTCTACGCACCCTTCCCCGGTTTGCTGTTCTGGGCCTGGCGCGGTCCGAGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAATGACGGTTTGCGGCCT > 1:91839/1‑236GAGAGCGCTCATGGAAATCGGTACGATCTGGATCATCATCGCGGCCTTGGTCATTCTGCTGGAGATCTGGGCCATCTGGCACATCATCGGCAGTGAACGGCGCGCCGAGCGCAAGATGCTGTGGATCGTCTTCGTGGTCTACGCACCCTTCCCCGGTTTGCTGTTCTGGGCCTGGCGCGGTCCGAGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAATGACGGTTTGCGGC > 2:831265/1‑234 AACGGCGCGCCGAGCGCAAGATGCTGTGGATCGTCTTCGTGGTCTACGCACCCTTCCCCGGTTTGCTGTTCTGGGCCTGGCGCGGTCCGAGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAATGACGGTTTGCGGCCTCG > 1:290760/1‑143 GCCGAGCGCAAGATGCTGTGGATCGTCTTCGTGGTCTACGCCCCCTTCCCCGGTTTGCTGTTCTGGGCCTGGCGCGGTCCGAGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAATGACGGTTTGCGGCCTCGGACCGCGCCAGGCCCAGAACAGCAAACCGGGGAAGGGT < 2:421286/173‑1 GCCGAGCGCAAGATGCTGTGGATCGTCTTCGTGGTCTACGCACCCTTCCCCGGTTTGCTGTTCTGGGCCTGGCGCGGTCCGAGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAGTGACGGTGTGCGGCCTCG > 2:826727/1‑135 TGGATCGTCTGCGTGGTCTACGCACCCTTCCCCGGTTTGCTGTTCTGGGCCTGGCGCGGTCCGAGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAATGACGGTTTGCGGCCTCGG‑GCGCGCCAGGCCCAGAACAGCAAACCGGGG < 1:114036/148‑1 tgGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAATGACGGTTTGCGGCCTCGGACCGAGCCAGGCCCAGAACAGCAAACCGGGGAAGGGTGC < 2:310590/93‑1 AGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAATGACGGTTTGCGGCCTCGGACCGCGCCAGGCCCAGAACAGC < 2:802698/77‑1 TCGGACCGCGCCAGGCCCAGAACAGCAAACCGGGGAAGGGTGCGTAGACCACGAAGACGATCCACAGCATCTTGCGCTCGGCGCGCCGTTCACTGCCGATGATGTGCCAGATGGCCCAGATCTCCAGCAGCATGACCAAGGCCGCGATGATGATCCAGATC > 2:217381/1‑161 TCGGACCGCGCCAGGCCCAGAACAGCAAACCGGGGAAGGGTGCGTAGACCACGAAGACGATCCACAGCATCTTGCGCTCGGCGCGCCGTTCACTGCCGATGATGTGCCAGATGGCCCAGATCTCCAGCAGAATGACCAAGGCCGCGATGATGATCCAGATCGTACCGATTTCCATGAGCGCTCTCCCAATGGCATGTATTGGGTTGGGTTGCTGCAAGCGCTGAGGGgt > 1:157791/1‑227 TCGGACCGCGCCAGGCCCAGAACAGCAAACCGGGGAAGGGTGCGTAGACCACGAAGACGATCCACAGCATCTTGCGCTCGGCGCGCCGTTCACTGCCGATGATGTGCCAGATGGCCCAGATCTCCAGCAGAATGACCAAGGCCGCGATGATGATCCAGATCGTACCGATTTCCATGAGCGCTCTCCCAATGGCATGTATTGGGTTGGGTTGCTGCAAGCGCT > 2:965710/1‑222 GAGAGCGCTCATGGAAATCGGTACGATCTGGATCATCATCGCGGCCTTGGTCATTCTGCTGGAGATCTGGGCCATCTGGCACATCATCGGCAGTGAACGGCGCGCCGAGCGCAAGATGCTGTGGATCGTCTTCGTGGTCTACGCACCCTTCCCCGGTTTGCTGTTCTGGGCCTGGCGCGGTCCGAGGGCGGTGAAGGGCAGGGCGGTGTTGCAGGAAAAATGACGGTTTGCGGCCTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3996589‑3996351‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcggACCGCGCCAGGCCCAGAACAGCAAACCGGGGAAGGGTGCGTAGACCACGAAGACGATCCACAGCATCTTGCGCTCGGCGCGCCGTTCACTGCCGATGATGTGCCAGATGGCCCAGATCTCCAGCAGAATGACCAAGGCCGCGATGATGATCCAGATCGTACCGATTTCCATGAGCGCTCTCCCAATGGCATGTATTGGGTTGGGTTGCTGCAAGCGCTGAGGGTT > AE015451/3996409‑3996633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |