New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 4265494 =88 (1.420)3 (0.050) 3/328 NT 3.8% coding (707/951 nt) vanB vanillate O‑demethylase oxidoreductase
?AE015451 4265623 = 70 (1.190)coding (836/951 nt) vanB vanillate O‑demethylase oxidoreductase
Rejected: Frequency below/above cutoff threshold.

GTTCAGGGCCTGTTCCTCTTCGGTGAGAAACAGATCGCGATGGTCCGGTGTGCCCTGCAGCACGCGTGTCAGGCAGGTGCCGCAAATACCCTGCTCGCACGACATGGCGATCTCGATACCATTCTCTTCCAGCACCTGCACCACGGTCCGGTCGGCTGGCACCTCGAACACCTGTCCCGTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4265678‑4265494
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgctgcAGGGCACACCGGACCATCGCGATCTGTTTCTCACCGAAGAGGAACAGGCCCTGAACGATCAGTTCACGCCCTGCTGCTCGCGCTCGAAGACGCCGCTGCTGGTGCTGGACATCTGACCCGTCTTACGACGAGGGCAGGATGACTTTCATGCCCGCGTCTGCCGCAGCCCCGCCAAAGGTTTCGGCATAGCGCAAGGTGGCATTGGCGTGCTCGCGCATGATCGC  >  AE015451/4265623‑4265846
                                                                                                                                                                                                                                                                                                                                                                                                                         
GTTCAGGGCCTGTTCCTCTTCGGTGAGAACCAGATCGCGATGGTCCGGTGTGCCCTGCAGCACGCGTGTCAGGCAGGTGCCGCAAATACCCTGCTCGCACGACATGGCGATCTCGATACCATTCTCTTCCAGCACCTGCACCACGGTCCGGTCGGCTGGCACCTCGAACACCTGTCCCGTG                                                                                                                                                                                                                                      <  1:27421/181‑1
                                                                               CCGCAAATACCCTGCTCGCACGACATGGCGATCTCGATACCATTCTCTTCCAGCACCTGCACCACGGTCCGGTCGGCTGGCACCTCGAACACCTGTCCCGTGCTGCAGGGCACACCGGACCATCGCGATCTGTTTCTCACCGAAGAGGAACAGGCCCTGAACGATCAGTTCACGCCCTGCTGCTCGCGCTCGAAGACG                                                                                                                                      >  1:168796/1‑198
                                                                                                                   ATACCATTCTCTTCCAGCACCTGCACCACGGTCCGGTCGGCTGGCACCTCGAACACCTGTCCCGTGCTGCAGGGCACACCGGACCATCGCGATCTGTTTCTCACCGAAGAGGAACAGGCCCTGAACGATCAGTTCACGCCCTGCTGCTCGCGCTCGAAGACGCCGCTGCTGGTGCTGGACATCTGACCCGT                                                                                                         >  2:920320/1‑191
                                                                                                                                                     GGTCGGCTGGCACCTCGAACACCTGTCCCGTGCTGCAGGGCACACCGGACCATCGCGATCTGTTTCTCACCGAAGAGGAACAGGCCCTGAACGATCAGTTCACGCCCTGCTGCTCGCGCTCGA                                                                                                                                           >  2:1030623/1‑123
                                                                                                                                                                                    GCTGCAGGGCACACCGGACCATCGCGATCTGTTTCTCACCGAAGAGGAACAGGCCCTGAACGATCAGTTCACGCCCTGCTGCTCGCGCTCGAAGACGCCGCTGCTGGTGCTGGACATCTGACCCGTCTTACGACGAGGGCAGGATGACTTTCATGCCCGCGTCTGCCGCAGCCCCGCCA                                                    >  2:1009790/1‑179
                                                                                                                                                                                      TGCAGGGCACACCGGACCATCGCGATCTGTTTCTCACCGAAGAGGAACAGGCCCTGAACGATCAGTTCACGCCCTGCTGCTCGCGCTCGAAGACGCCGCTGCTGGTGCTGGACATCTGACCCGTCTTACGACGAGGGCA                                                                                          >  2:821664/1‑139
                                                                                                                                                                                       GCAGGGCACACCGGACCATCGCGATCTGTTTCTCACCGAAGAGGAACAGGCCCTGAACGATCAGTTCACGCCCTGCTGCTCGCGCTCGAAGACGCCGCTGCTGGTGCTGGACATCTGACCCGTCTTACGACGAGGGCAGGATGACTTTCATGCCCGCGTCTGCCGCAGCCCCGCCAAAGGTTTCGGCATAGCGCAAGGTGGCATTGGCGTGCTCGCGCATGATCGC  <  1:800603/226‑1
                                                                                                                                                                                                                                                                                                                                                                                                                         
GTTCAGGGCCTGTTCCTCTTCGGTGAGAAACAGATCGCGATGGTCCGGTGTGCCCTGCAGCACGCGTGTCAGGCAGGTGCCGCAAATACCCTGCTCGCACGACATGGCGATCTCGATACCATTCTCTTCCAGCACCTGCACCACGGTCCGGTCGGCTGGCACCTCGAACACCTGTCCCGTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4265678‑4265494
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgctgcAGGGCACACCGGACCATCGCGATCTGTTTCTCACCGAAGAGGAACAGGCCCTGAACGATCAGTTCACGCCCTGCTGCTCGCGCTCGAAGACGCCGCTGCTGGTGCTGGACATCTGACCCGTCTTACGACGAGGGCAGGATGACTTTCATGCCCGCGTCTGCCGCAGCCCCGCCAAAGGTTTCGGCATAGCGCAAGGTGGCATTGGCGTGCTCGCGCATGATCGC  >  AE015451/4265623‑4265846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.