New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 5325153 | 54 (0.870) | 6 (0.110) | 6/316 | NT | 10.8% | coding (66/279 nt) | PP_4685 | conserved protein of unknown function |
? | AE015451 | = 5325139 | 50 (0.880) | coding (52/279 nt) | PP_4685 | conserved protein of unknown function |
TTGCCTGGCCTGTAAGTTCGTCACCTTCCTGTGCCTGCCCGCCAATGGGCAGGCACAGGCCGCTCACCCTCCGATGGCAAAAAGCCGCATATTTCCCAACGCCCGCTACACTCCTCTCAGACCTGCTCGCGATTTATCCCCCCATTCCCGTTCAGCCATCGCAAGGAGGCTCGATGAACGATGAATTGCAGCATCTGAAGAACCTTGGCAAGACGTCTGCGCAGTGGCTGCATGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5324915‑5325153 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcatgcagccACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAATATGCGGCTTTTTGCCATCGGAGGGTGAGCGGCCTGTGCCTGCCCATTGGCGGGCAGGCACAGGAAGGTGACGAA < AE015451/5325139‑5324931 TTGCCTGGCCTGTAAGTTCGTCACCTTCCTGTGCCTGCCCGCCAATGGGCAGGCACAGGCCGCTCACCCTCCGATGGCAAAAAGCCGCATATTTCCCAACGCCCGCTACACTCCTCTCAGACCTGCTCGCGATTTATCCCCCCATTCCCGTTCAGCCATCGCAAGGAGGCTCGATGAACGATGAATTGCAGCATCTGAAGAACCTTGGCAAGACGTCTGCGCAGTGGCTGCATGCA < 1:914538/236‑1 ACCTTCCTGTGCCTGCCCGCCAATGGGCAGGCACAGGCCGCTCACCCTCCGATGGCAAAAAGCCGCATATTTCCCAACGCCCGCTACACTCCTCTCAGACCTGCTCGCGATTTATCCCCCCATTCCCGTTCAGCCATCGCAAGGAGGCTCGATGAACGATGAATTGCAGCATCTGAAGAACCTTGGCAAGACGTCTGCGCAGTGGCTGCATGCAGCCACTGCGCAGACGTCT < 1:8315/232‑1 ACCCTCCGATGGCAAAAAGCCGCATATTTCCCAACGCCCGCTACACTCCTCTCAGACCTGCTCGCGATTTATCCCCCCCTTCCCGTTCAGCCATCGCAAGGAGGCTCGATGAACGATGAATTGCAGCATCTGAAGAACCATGGCAAGACGTCTGCGCAGTGGCgg > 2:373322/1‑163 CTGCTCGCGATTTATCCCCCCATTCCCGGTCAGCCATCGCAAGGAGGCGCGATGAACGATGAATTGCAGCATCTGAAGAACCTTGGCAAGACGTCTGCGCAGTGGCTGCATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCA < 1:109266/161‑1 TATCCCCCCATTCCCGTTCAGCCATCGCAAGGAGGCTCGATGAATGATGAATTGCAGCATCTGAAGAACCTTGGCAAGACGTCTGCGCAGTGGCTGCATGCAGCC < 2:978542/105‑1 AGCCGTCGCAAGGAGGCTCGATGGACGAGGAATGGCGGCATCTGGAGAACCTTGGCAAGACGTCTGCGCAGTGGCTGCATGCAGC < 2:6574/85‑1 GCTCGATGAACGATGAATTGCAGCATCTGAAGAACCTTGGCAAGACGTCTGCGCAGTGGCTGCATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGG > 1:435512/1‑158 GATGAACGATGAATTGCAGCATCTGAAGAACCTTGGCAAGACGTCTGCGCAGTGGCTGCATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGG > 1:812550/1‑137 TGAATTGCAGCATCTGAAGAACCTTGGCAAGACGTCTGCGCAGTGGCT > 1:586089/1‑48 AGACGTCTGCGCAGTGGCTGCATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAATATGCGGCTTTTTGCCATCGGAGGGTGAGCGGCCTGTGCCTGCCCATTGGCGGGCAG > 1:529416/1‑220 AGACGTCTGCGCAGTGGCTGCATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAATATGCGGCTTTTTGCCATCGGAGGGTGAGCGGCCTGTGCCTGCCCATTGGCGGGCAG < 2:529415/220‑1 TGCATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAATATGCGGCTTTTTGCCATCGGAGGGTGAGCGGCCTGTGCCTGCCCATTGGCGGGCAGG > 1:1112856/1‑203 GCATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAATATGCGGCTTTTTGCCATCGGAGGGTGAGCGGCCTGTGCCTGCCC > 2:647883/1‑189 CATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATTCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAAT > 2:927369/1‑144 CATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAATATGCGGCTTTTTGCCATCGGAGGGTGAGCGGCCTGTGCCTGCCCATTGGCGGGCAGGCACAGGAAGGTGACGAA > 1:460242/1‑218 CATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAATATGCGGCTTTTTGCCATCGGAGGGTGAGCGGCCTGTGCCTGCCCATTGGCGGGCAGGCACAGGAAG > 1:1100413/1‑210 CATGCAGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAATATGCGGCTTTTTGCCATCGGAGGGTGAGCGGCCTGTGCCTGCCCATTGGCGGGCA > 1:682679/1‑199 AGCCACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCA > 2:586088/1‑48 TTGCCTGGCCTGTAAGTTCGTCACCTTCCTGTGCCTGCCCGCCAATGGGCAGGCACAGGCCGCTCACCCTCCGATGGCAAAAAGCCGCATATTTCCCAACGCCCGCTACACTCCTCTCAGACCTGCTCGCGATTTATCCCCCCATTCCCGTTCAGCCATCGCAAGGAGGCTCGATGAACGATGAATTGCAGCATCTGAAGAACCTTGGCAAGACGTCTGCGCAGTGGCTGCATGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5324915‑5325153 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcatgcagccACTGCGCAGACGTCTTGCCAAGGTTCTTCAGATGCTGCAATTCATCGTTCATCGAGCCTCCTTGCGATGGCTGAACGGGAATGGGGGGATAAATCGCGAGCAGGTCTGAGAGGAGTGTAGCGGGCGTTGGGAAATATGCGGCTTTTTGCCATCGGAGGGTGAGCGGCCTGTGCCTGCCCATTGGCGGGCAGGCACAGGAAGGTGACGAA < AE015451/5325139‑5324931 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |