| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5455391 = | 46 (0.740) | 3 (0.050) | 3/328 | NT | 6.1% | coding (202/762 nt) | PP_4792 | conserved exported protein of unknown function |
| ? | AE015451 | 5455507 = | 48 (0.810) | coding (86/762 nt) | PP_4792 | conserved exported protein of unknown function | |||||
CATGGTGGCTGCGTACGCGGCGGCCCCGGTTGGCGGCGCTTTGCTTTAGCGTAGGGCTGGGTGGCCTGTGGTTGATGAGCCTGCCGCTGGTGGTGCAGGAAACCGCCCGTGTGCTGGAAAGTGAGCCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5455522‑5455391‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccgcGTACGCAGCCACCATGCCGCAAGCAGCAGCAAGAACAGCACGCCCGGCGGCATCAGCCATTGTTTGATGAAGAATCGGATCGGCATCGGCCACACCTCCTTGGCAGGCGTGCAGCCTAGAAGGATCGACGCCGGTCAACAAGTGCGTACC > AE015451/5455507‑5455656 CATGGTGGCTGCGTACGCGGCGGCCCCGGTTGGCGGCGCTTTGCGTTAGCGTAGTGCTGGGTGGCCTGTGGTTGATGAGCCTGCCGCTGGTGGTGCAGGAAACCGCCCGTGTGCTGGAAAGTGAGCCGCC < 2:1030710/130‑1 TTTGCTTTAGCGTAGGGCTGGGTGGCCTGTGGTTGATGAGCCTGCCGCTGGTGGTGCAGGAAACCGCCCGTGTGCTGGAAAGTGAGCCGCCGCGTACGCAGCCACCATGCCGCAAGCAGCAGCAAGAACAGCACGCCCGGCGGCATCAGCCATTGTTTGATGAAGAATCGGATCGGCATCGGC > 1:308094/1‑183 TTTGCTTTAGCGTAGGGCTGGGTGGCCTGTGGTTGATGAGCCTGCCGCTGGTGGTGCAGGAAACCGCCCGTGTGCTGGAAAGTGAGCCGCCGCGTACGCAGCCACCATGCCGCAAGCAGCAGCAAGAACAGCACGCCCGGCGGCATCAGCCATTGTTTGATGAAGAATCGGATCGGCATCGGC < 2:308093/183‑1 CGCTGGTGGTGCAGGAAACCGCCCGTGTGCTGGAAAGTGAGCCGCCGCGTACGCAGCCACCATGCCGCAAGCAGCAGCAAGAACAGCACGCCCGGCGGCATCAGCCCTTG > 2:178814/1‑110 CCGCGTACGCAGCCACCATGCCGCAAGCAGCAGCAAGAACAGCACGCCCGGCGGCATCAGCCATTGTGTGATGAAGAATCGGATCGGCATCGGCCACACCTCCTTGGCAGGCGTGCAGCCTAGAAGGATCGACGCCGGTCAACAAGTGCGTACC < 2:75556/154‑1 CATGGTGGCTGCGTACGCGGCGGCCCCGGTTGGCGGCGCTTTGCTTTAGCGTAGGGCTGGGTGGCCTGTGGTTGATGAGCCTGCCGCTGGTGGTGCAGGAAACCGCCCGTGTGCTGGAAAGTGAGCCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5455522‑5455391‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccgcGTACGCAGCCACCATGCCGCAAGCAGCAGCAAGAACAGCACGCCCGGCGGCATCAGCCATTGTTTGATGAAGAATCGGATCGGCATCGGCCACACCTCCTTGGCAGGCGTGCAGCCTAGAAGGATCGACGCCGGTCAACAAGTGCGTACC > AE015451/5455507‑5455656 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |