New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5856275	62 (1.000)	5 (0.090)	4/326	NT	7.7%	coding (202/1392 nt)	PP_5133	conserved membrane protein of unknown function
	?	AE015451	= 5856285	61 (1.040)					coding (212/1392 nt)	PP_5133	conserved membrane protein of unknown function

CCGGGCGTGTGGGTTATGCTTCTGCCTTGACCTGTGCAATGGAAGACCTTGTGACTGCACCCACGCCACTGGACAAGCGCTGGCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5856036‑5856275 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccctgcTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGTGCAGTCACAAGGTCTTCCATT  <  AE015451/5856285‑5856073                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGGGCGTGTGGGTTATGCTTCTGCCTTGACCTGTGCAATGGAAGACCTTGTGACTGCACCCACGCCACTGGACAAGCGCTGGCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCC                                                                                                                                                                                                                           >  1:39182/1‑236  CGGGCGTGTGGGTTATGCTTCTGCCTTGACCTGTGCAATGGAAGACCTTGTGACTGCACCCACGCCACTGGACAAGCGCTGGCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCC                                                                                                                                                                                                                           >  1:595512/1‑235  CGGGCGTGTGGGTTATGCTTCTGCCTTGACCTGTGCAATGGAAGACCTTGTGACTGCACCCACGCCACTGGACAAGCGCTGGCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCC                                                                                                                                                                                                                           >  1:738505/1‑235                                                                                                              AGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTG                                                                                                                                                                                                                        >  2:213159/1‑130                                                                                                                            CGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGAGAGCGAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACAGGACCGGCGCCCT                                                                                                                                                                                                                         <  2:477653/115‑1                                                                                                                                                 ACCGCCCCGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCT                                                                                                                                                                                                                         <  2:188593/94‑1                                                                                                                                                    GCCCCGCCCGCCAGCTCGGTGGCGACCTGGCCGCGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGC                                                                                                                                                                                                                            <  2:142563/88‑1                                                                                                                                                                                          ATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGCTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCG                                                                                                                                                   >  2:887621/1‑123                                                                                                                                                                                                       CGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGCTTCCACTGGCGCAGGGCGCCGGTCATGTCATCGCGCT                                                                                                                                                                                  >  1:1047346/1‑79                                                                                                                                                                                                       CGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGCTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGGTGGCTTCCTGGT                                                                                                 >  2:814328/1‑160                                                                                                                                                                                                         CTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGCTTCCAATGGCGCAGGGC                                                                                                                                                                                                      >  2:190108/1‑57                                                                                                                                                                                                               CTGGCCGAGCGCGATGACATGACCGGCGCCCTGCTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCCGGAACAGCGCACGTGTTTCGATGC                                                                                                                                                    >  2:668017/1‑101                                                                                                                                                                                                                                            CCTGCTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGT                       <  2:716883/197‑1                                                                                                                                                                                                                                                CTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGTGCAGTCACAAGGTCTTCCATT  <  1:1126830/214‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGGGCGTGTGGGTTATGCTTCTGCCTTGACCTGTGCAATGGAAGACCTTGTGACTGCACCCACGCCACTGGACAAGCGCTGGCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5856036‑5856275 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccctgcTTCCAATGGCGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAGGCGTACCGCTTCGGTGAGCCAGCGCTTGTCCAGTGGCGTGGGTGCAGTCACAAGGTCTTCCATT  <  AE015451/5856285‑5856073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.