New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	6032294 =	54 (0.870)	7 (0.120)	6/322	NT	12.7%	coding (1148/1590 nt)	dppA‑IV	periplasmic dipeptide transport protein
	?	AE015451	6032394 =	46 (0.790)					coding (1248/1590 nt)	dppA‑IV	periplasmic dipeptide transport protein

TCAGCTGGTCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/6032536‑6032294 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccaaggcCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAGGCGCAGACACTGATCCAGCAGCAGGCGCTGT  >  AE015451/6032394‑6032623                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCAGCTGGTCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGC                                                                                                                                                                                                                                                <  1:756692/235‑1      TGGTCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAG                                                                                                                                                                                                                                          <  1:367770/236‑1         TCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAG                                                                                                                                                                                                                                          <  2:730314/233‑1           GAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGG                                                                                                                                                                                                                                         <  2:671600/232‑1                            AGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCTTGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCA                                                                                                                                                                                                                                            <  1:596055/212‑1                                   GAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGC                                                                                                                                                                                                                                                <  1:544031/201‑1                                                                AGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAA                                                                                                                                                                                                                                           <  2:567152/177‑1                                                                                           CCGGCTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCT                                                                                                                                                                                                           <  1:135088/182‑1                                                                                                          CGCCCGCCCAGCCCATGAACAGCAATTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCT                                                                                                                                                                                                           <  1:100468/167‑1                                                                                                             CCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAG                                                                                                                                                                                                                                          <  2:859398/133‑1                                                                                                                                             CCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAG                                                                                                                                                                                                                                          <  2:575907/101‑1                                                                                                                                                        GCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTT                                                                                                                                                             >  1:860008/1‑167                                                                                                                                                        GCGGCGGATAAGCGCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCTGCTTGCAGCATCTGCGCGCCAc                                                                                                                                                                                                                                           >  2:273299/1‑88                                                                                                                                                                TAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCC                                                                                 <  1:751920/235‑1                                                                                                                                                                       GCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGCTGGCGAGCATGACTTGCTGT                                                                                                                                                                                                                    <  2:1946/97‑1                                                                                                                                                                             TTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGG                                                                                                                                                                                                                                         <  2:36436/70‑1                                                                                                                                                                                      GCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCGGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGAT                                                                                        >  1:891836/1‑206                                                                                                                                                                                                                 CGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTACGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCG                                                                            <  2:524792/191‑1                                                                                                                                                                                                                                           CGCCAAGGCCGGCGAGCATGCCTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCA                                                                                                                                                                       <  1:1124297/74‑1                                                                                                                                                                                                                                            GCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAGGCGCAGACACTGATCCAGCAGCAGGCGC     >  1:665753/1‑235                                                                                                                                                                                                                                            GCCAAGGCCGGCGAGCATGACTTGCGGGTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGcc                                                                                                                                             >  2:138510/1‑97                                                                                                                                                                                                                                              CAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAGGCGCAGACACTGATCCAGCAGCAGGCGCTGT  <  1:821373/236‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCAGCTGGTCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAGGAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCTCGCCCCATTCGATCACGCGGATTTCAGCCTTGATACCAATCTTCGCCAAGTCGGCTTGCAGCATCTGCGCGCCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/6032536‑6032294 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccaaggcCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAGGCGCAGACACTGATCCAGCAGCAGGCGCTGT  >  AE015451/6032394‑6032623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.