New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5034489	0 (0.000)	8 (0.140)	6/328	NT	100%	coding (529/1536 nt)	PP_4439	transposase
	?	AE015451	= 5037421	NA (NA)					coding (513/1536 nt)	PP_4443	transposase

CCACGGCAATCGCCCAAACGTGCACCATTGCCGCCGCAGTTTCCGCGTACCGTGATTCGTCACGAACCCGAAAACACCCAATGCGCCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCAGGGGTATTCACGGTCGAGCATCATGTGCGTGGCAAATGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCGACTCCAGCCACTGGTCGATGCACTACGTGAAGCGGTGCTGAACCAGGGCGTGATTCACGCTGAT  >  AE015451/5034258‑5034719                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                       ccACGGCAATCGCCCAAACGTGCACCATTGCCGCCGCAGTTTCCGCGTACCGTGATTCGTCACGAACCCGAAAACACCCAATGCGCCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCAGGGGTATTCACGGTCGAGCATCATGTGCGTGGCAAATGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCctg                                                                                                                                                                                                                                     <  1:165186‑M1/235‑4 (MQ=255)                              gccgccGCAGTTTCCGCGTACCGTGATTCGTCACGAACCCGAAAACACCCAATGCGCCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCAGGGGTATTCACGGTCGAGCATCATGTGCGTGGCAAATGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCctggatcagtgtttcgcactgacggcaggccca                                                                                                                                                                                                       <  1:566561‑M1/236‑34 (MQ=255)                                     cAGTTTCCGCGTACCGTGATTCGTCACGAACCCGAAAACACCCAATGCGCCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCAGGGGTATTCACGGTCGAGCATCATGTGCGTGGCAAATGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCctggatcagtgtttcgcactgacg                                                                                                                                                                                                                <  1:43680‑M1/220‑25 (MQ=255)                                                                                                     ttCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCAGGGGTATTCACGGTCGAGCATCATGTGCGTGGCAAATGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCctggatcagtgtttcgcactgacggcaggcccatttgccacgcacatgatgctcg                                                                                                                                                                                 <  1:982459‑M1/187‑56 (MQ=255)                                                                                                               cGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCAGGGGTATTCACGGTCGAGCATCATGTGCGTGGCAAATGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCctggatcagtgtttcgcactgacggcaggcc                                                                                                                                                                                                         <  2:396868‑M1/153‑32 (MQ=255)                                                                                                                         gTCAGCGAGAAGCTGGATTACACGCCAGGGGTACTCACGGTCGAGCATCATGTGCGTGGCAAATGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCctggatcagtg                                                                                                                                                                                                                             <  2:182826‑M1/123‑12 (MQ=255)                                                                                                                           cAGCGAGAAGCTAGATTACACGCCAGGGGTATTCACGGTCGAGCATAATGTGCGTGGAAAATGGGCCTGCCGACAGTGCGAAACACTCATCCAGGCGCTGGTACCGGCGCctggatcagtgtttc                                                                                                                                                                                                                         <  2:475041‑M1/125‑16 (MQ=255)                                                                                                                                         aTTACACGCCAGGGGTATTCACGGTCGAGCATCATGTGCGTGGCAAATGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCctggatcagtgtttcgcactgacggcaggcccatttgccacgcacatgatgctcg                                                                                                                                                                                 <  2:1046268‑M1/151‑56 (MQ=255)                                                                                                                                                               ggTCGAGCATCATGTGCGTGGGAAAGGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCctggatcagtgtttcgc                                                                                                                                                                                                                       <  2:6627‑M1/91‑18 (MQ=255)                                                                                                                                                                                                                                  ccGGCGCctggatcagggtttcgcactgacggcaggcccatttgccacgcacatgttgctcgacggtaaacacccccggcgtgtaatccagcttctcgctgacgtcttcgccgatgcgttggagttggcagccacaggcgcactgggtgttttcgggttcgtgacgaatcaccgcgcgtggaaactgcggcggcaatggggcgcgtttcggcgattgccgtggctc             >  1:923561‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                  ccGGCGCctggatcagggtttcgcactgacggcaggcccatttgccacgcacatgttgctcgacggtaaacacccccggcgtgtaatccagcttctcgctgacgtcttcgccgatgcgttggagttggcagccacaggcgcactgggtgttttcgggttcgtgacgaatcaccgcgcgtggaaactgcggcggcaat                                          >  1:47384‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                   cGGCGCctggatcagggtttcgcactgacggcaggcccatttgccacgcacatgttgctcgacggtaaacacccccggcgtgtactccagcttctcgctgacgtctt                                                                                                                                   >  1:366558‑M1/1‑6 (MQ=255)                                                                                                                                                                                                                                   cGGCGCctggatcagggtttcgcactgacggcaggcccatttgccacgcacatgttgctcgacggtaaacacccccggcgtgtaatccagcttctcgctgacgtcttcgccgatgcgttggagttggcagccacaggcgcactgggtgttttcgggttcgtgacgaatcaccgcgcgtggaaactgcggcggcaatggggcgcgtttcggcgattgccgtggctcggcttgtgacg  <  1:640958‑M1/236‑231 (MQ=255)                                                                                                                                                                                                                                    ggCGCctggatcagggtttcgcactgacggcaggcccatttgccacgcacatgttgctcgacggtaaacaccc                                                                                                                                                                    <  2:1038595‑M1/73‑69 (MQ=255)                                                                                                                                                                                                                                    ggCGCctggatcagggtttcgcactgacggcaggcccatttgccacgcacatgttgctcgacggtaaacaccc                                                                                                                                                                    >  1:1038596‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                        cctggatcagggtttcgcactgacggcaggcccatttgccacgcacatgttgctcgacggtaaacacccccggcgtgtaatccagcttctcgctgacgtcttcgccgatgcgttggagttggc                                                                                                              <  2:1059819‑M1/123‑123 (MQ=255)                                                                                                                                                                                                                                        cctggatcagggtttcgcactgacggcaggcccatttgccacgcacatgttgctcgacggtaaacacccccggcgtgtaatccagcttctcgctgacgtcttcgccgatgcgttggagttggc                                                                                                              >  1:1059820‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                       CCACGGCAATCGCCCAAACGTGCACCATTGCCGCCGCAGTTTCCGCGTACCGTGATTCGTCACGAACCCGAAAACACCCAATGCGCCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCAGGGGTATTCACGGTCGAGCATCATGTGCGTGGCAAATGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCGCCGGTACCGGCGCAGGTTATCGACAAAGGTGTCCCGACCGCAGGCTTGCTGGCCCATGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACCGGCAGGAGAAAATCTTTGGCCGCGCCGGGCTGGCGATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGTGTGCGACTCCAGCCACTGGTCGATGCACTACGTGAAGCGGTGCTGAACCAGGGCGTGATTCACGCTGAT  >  AE015451/5034258‑5034719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.