New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 873907 =60 (0.970)3 (0.050) 3/330 NT 5.2% coding (265/621 nt) PP_0758 conserved protein of unknown function
?AE015451 873953 = 52 (0.880)coding (311/621 nt) PP_0758 conserved protein of unknown function

CTGGGGCGTCGGTGCTGATCCAGCGTCAGCTTGACGGCCAGCAGCAACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGACCCGGACACGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGC  >  AE015451/873737‑874184
                                                                                                                                                                                                                        |                                                                                                                                                                                                                                       
cTGGGGCGTCGGTGCTGATCCAGCGTCAGCTTGACGGCCAGCAGCAACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTgg                                                                                                                                                                                                                      >  1:871930/1‑236 (MQ=255)
   gggCGTCGGTGCTGATCCAGCGTCAGCTTGACGGCCAGCAGCAACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTg                                                                                                                                                                                                                   <  1:757720/236‑1 (MQ=255)
      cGTCGGTGCTGATCCAGCGTCAGCTTGACGGCCAGCAGCAACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTg                                                                                                                                                                                                                   <  2:960358/233‑1 (MQ=255)
         cGGTGCTGATCCAGCGTCAGCTTGACGGCCAGCAGCAACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCaa                                                                                                                                                                                                                                   <  2:755621/214‑1 (MQ=255)
           gTGCTGATCCAGCGTCAGCTTGACGGCCAGCAGCAACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCggg                                                                                                                                                                                                           >  1:726507/1‑236 (MQ=255)
                       cGTCAGCTTGACGGCCAGCAGCAACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGgc                                                                                                                                                                                                    <  1:459268/231‑1 (MQ=255)
                                   ggCCAGCAGCAACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTTCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCCTCGCTGTACTTTg                                                                                                                                                                                    <  1:598771/235‑1 (MQ=255)
                                        gcagcaACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCGAACGCCCGTTc                                                                                                                                                                                                                         >  1:612882/1‑193 (MQ=255)
                                          agcaACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGgtg                                                                                                                                                                            <  1:329808/236‑1 (MQ=255)
                                                    gaaGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCt                                                                                                                                                                  <  2:673864/235‑1 (MQ=255)
                                                       ggCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCt                                                                                                                                                                  <  2:399372/233‑1 (MQ=255)
                                                            gcTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCggggg                                                                                                                                                                                                         <  2:55085/189‑1 (MQ=255)
                                                            gcTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACttt                                                                                                                                                                                     <  2:377580/209‑1 (MQ=255)
                                                               gggggTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAg                                                                                                                                                       >  1:976994/1‑236 (MQ=255)
                                                                     tGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTg                                                                                                                                                                                                                       <  2:841780/166‑1 (MQ=255)
                                                                          ccGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGAcc                                                                                                                                                   <  1:353694/229‑1 (MQ=255)
                                                                              ccTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTg                                                                                                                                                                                                                       <  2:928753/157‑1 (MQ=255)
                                                                                  gCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGCACTACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGtt                                                                                                                                    <  1:1049799/236‑1 (MQ=255)
                                                                                  gCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGtt                                                                                                                                    <  1:1057342/236‑1 (MQ=255)
                                                                                    tCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAACCGCCCg                                                                                                                                                                                                                            >  2:429641/1‑146 (MQ=255)
                                                                                         gACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGCTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGtt                                                                                                                                    >  1:547966/1‑229 (MQ=255)
                                                                                         gACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGCTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGtt                                                                                                                                    <  2:547965/229‑1 (MQ=255)
                                                                                                     aCCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAggc                                                                                                                 >  1:949258/1‑236 (MQ=255)
                                                                                                      ccccTGCCCATGCCCGCGCCGAAACGCTGGCCGAACCACCTATGTTTCGCGATGCATTTCGTCAGAGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGccc                                                                                                                                                                                                                             <  2:880841/127‑1 (MQ=255)
                                                                                                       gccTGCCCATGCCCGCGCCGAAACGCTGGCCGAGCCACCGATGTTTCGCGATGCATTTCGTCGGCGCCGCGGCCTGAGGCCGGCCAACGGCTTTTGCGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCGCGGGGGAgg                                                                                                                                                                                                      <  2:587958/148‑1 (MQ=255)
                                                                                                       cccTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAGCGCCCGTTCTGGTTGACCCCGGGGGAGGGcgcg                                                                                                                                                                                                 >  2:206391/1‑154 (MQ=255)
                                                                                                        ccTGCCCATGCCCGCGCCGAAGCGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGgc                                                                                                                                                                                                    <  2:328555/150‑1 (MQ=255)
                                                                                                        ccTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCACCGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGGGGGCGCGTCGCTGTACTGTGcggcggg                                                                                                                                                                             >  2:272610/1‑172 (MQ=255)
                                                                                                               ctGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCa                                                                                                                                                        <  2:315544/186‑1 (MQ=255)
                                                                                                               aTGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTg                                                                                                                                   >  2:474954/1‑208 (MQ=255)
                                                                                                               aTGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGACGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGtt                                                                                                                                    <  1:557691/207‑1 (MQ=255)
                                                                                                                    cgcgCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGgtg                                                                                                                                                                            >  2:1073858/1‑162 (MQ=255)
                                                                                                                    cgcgCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGgtg                                                                                                                                                                            <  1:1073859/162‑1 (MQ=255)
                                                                                                                    cgcgCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTgg                                                                                                                                                                         >  2:272119/1‑165 (MQ=255)
                                                                                                                        ccGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCa                                                                                                                    <  2:803642/214‑1 (MQ=255)
                                                                                                                         cGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTg                                                                                                                                                          >  2:430466/1‑175 (MQ=255)
                                                                                                                         cGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGc                                                                                             >  1:691967/1‑236 (MQ=255)
                                                                                                                            aaCGCTGGCCGAACAACCGATGTTTCGCGCTGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTg                                                                                                                                                                                                                   <  2:274372/115‑1 (MQ=255)
                                                                                                                                      gAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGCgggggggg                                                                                                                                                                     >  2:338427/1‑151 (MQ=255)
                                                                                                                                      cctcccccggggtcaaccagaacgggcgtttgcgcaCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCCGCGTGCGCAAACGCCCGt                                                                                                                                                                                                                           <  1:498427‑M1/61‑1 (MQ=255)
                                                                                                                                                   caaccagaacgggcgtttgcgcaCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGc                                                                                                                                                                                                                               <  1:861643‑M1/57‑1 (MQ=255)
                                                                                                                                                    tCGCGATGCCTCTCGTCAGCGCCGCTGGCTGATGCCGGCGAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGCCCCCGGGGGAGGTCGCGTCGCTGTACTTTGCGGCGgtg                                                                                                                                                                            <  2:308520/130‑1 (MQ=255)
                                                                                                                                                     cgcgATGCATTTCGTCAGCGCCGCTGCCTGATGCCAGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTTCTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGc                                                                                             <  2:600467/208‑1 (MQ=255)
                                                                                                                                                      gcgATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAggc                                                                 <  1:72148/235‑1 (MQ=255)
                                                                                                                                                       cgATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTCCGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCCGGCCCAg                                                                                                                                                 >  2:7725/1‑154 (MQ=255)
                                                                                                                                                         aTGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCACCGGCTTTTACGAAGGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTg                                                                                                                                                                                                                   >  2:438599/1‑86 (MQ=255)
                                                                                                                                                          tGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGgt                                                                                                                                                                             >  2:108534/1‑123 (MQ=255)
                                                                                                                                                          tGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCt                                                            >  1:1048271/1‑236 (MQ=255)
                                                                                                                                                           acgggcgtttgcgcacgcggccacgccattcgtaaaagccgttggccggcatcaggcagcgTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAgg                                                                                                                                                                                                      <  1:498427‑M2/36‑1 (MQ=255)
                                                                                                                                                               gcgtttgcgcacgctgccacgccattcgtaaaagccgttggccggcatcaggcagcgTGCGCAAACGCCCGTTCTGGTTg                                                                                                                                                                                                                   <  1:861643‑M2/23‑1 (MQ=255)
                                                                                                                                                                          cgctgccacgccattcgtaaaagccgttggccggcatcaggcagcgTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAg                                                                                                                                                 <  2:523538‑M2/89‑1 (MQ=255)
                                                                                                                                                                               CCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGcc                                                                                                             <  2:852981‑M1/166‑1 (MQ=255)
                                                                                                                                                                                 tGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGAccc                                                  <  1:704308/223‑1 (MQ=255)
                                                                                                                                                                                        ggCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTg                                                                                                                                   <  2:57527/135‑1 (MQ=255)
                                                                                                                                                                                            caCGGCTTTTACGAATGGCGTGGCAGCGGGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGtt                                                                                                                                    <  2:76004/129‑1 (MQ=255)
                                                                                                                                                                                            aaCGGCTTTTACGAATGGCGTGGCAGCGTTAGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGATTTGCACGGTGGTGACCCACGCGGCTATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGAccc                                                  >  2:599688/1‑212 (MQ=255)
                                                                                                                                                                                            aaCGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGACCCGGACACGCCGAt                                      >  2:929575/1‑224 (MQ=255)
                                                                                                                                                                                             aCGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGGGGGAGGCCTATCCCGTGCAGGACCAGGTATGGCTGa                                                                                                                                       >  1:111506/1‑126 (MQ=255)
                                                                                                                                                                                                            ggCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCGGAGTTGCGCGGTGGTGACCCAGGCGGCCATGCATCAGCGTCGGCCGCTCATCCTCTTCGAAGCg                                                                         <  2:862760/173‑1 (MQ=255)
                                                                                                                                                                                                              cGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCt                                                                                         >  2:80176/1‑155 (MQ=255)
                                                                                                                                                                                                              cGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAggc                                                                 <  1:524704/179‑1 (MQ=255)
                                                                                                                                                                                                                 ggcagcgTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGACCCGGACACGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGaccacc     >  1:856941‑M2/8‑236 (MQ=255)
                                                                                                                                                                                                                    agcgTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGACCCGGACACGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGc  >  1:777093‑M2/5‑236 (MQ=255)
                                                                                                                                                                                                                        |                                                                                                                                                                                                                                       
CTGGGGCGTCGGTGCTGATCCAGCGTCAGCTTGACGGCCAGCAGCAACTGGCCAAGGCGCGCTGGGGGTTGACCCCGGCCTGGCTCACCGACCTGTCCCGCACCCCTGCCCATGCCCGCGCCGAAACGCTGGCCGAACAACCGATGTTTCGCGATGCATTTCGTCAGCGCCGCTGCCTGATGCCGGCCAACGGCTTTTACGAATGGCGTGGCAGCGTGCGCAAACGCCCGTTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGGCAGGCGGCCTGGCTTGACCCGGACACGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGC  >  AE015451/873737‑874184

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.